Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0790 |
Symbol | |
ID | 8018419 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 818519 |
End bp | 819802 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829568 |
Product | Gluconate 2-dehydrogenase (acceptor) |
Protein accession | YP_002980763 |
Protein GI | 241662403 |
COG category | [C] Energy production and conversion |
COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.310202 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 0.354457 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA TCGCTTCCTT CTCGCTGCTG TTGCTCGCCG GCCCGCTGGC GAATGCGTGG GCGAAGGACA CGCCGGCTGA CACCGCGCAG ATCAAACGCG GCGAATACCT GGCCATTGCG GCGGACTGCG CAGCCTGCCA TACGGCGCCC GGCGGCAAGC CCTTTGCCGG CGGCTTGCCG ATGCAGATTC CGATGCTGGG CACGATCTAC AGCAGCAACA TCACGCCCGA TGAAAAGACC GGCATCGGCA AATGGACCTA CGAAGAATTC GAGCGCGCCG TGCGAAAGGG CGTGGACGAT GACGGCAACA ACCTGTATCC GGCCATGCCG TATCCGTCGT ACGCCAAGAT CAACGATGCG GACATGCGCG ATCTCTATGC GTACTTCCGC AACGGCGTGA CGGCGGTGGA AAACCGGCGG CCGCGTAGCA CGATCCGATG GCCGCTGAAC ATGCGCTGGC CGCTCAAGCT TTGGAACCTT CTCTTCCTCA AGAGCGAGCC GTACACCCCC AAGAGTGACA AGTCGCCGAC GTGGAATCGC GGTGCGTACC TCACGCAAGG CCTGGCGCAC TGCGGCACGT GCCATACACC GCGCGGTTTC GCCATGCAGG AGAAGGCGCT GGACGAGCGC GGCAGCGGCT ATCTGGCTGG CTCGACGCTC TCGGGCTGGA CGGCGTTCAA CATCACCTCG GACCCGACGA GCGGCATCGG CGCATGGAAG CCCGAACAGC TCGTGCAATA CCTGCGCACC GGCAGTGTGC CCGGCGTGGC ACAGGCCGCA GGTCCGATGG GTGAAGCCGT GCAGCACAGC TTTTCGAAGA TGACGATGCA GGACGTCCAG GCCATCGCCG AATATCTGCG GACCGTGCCC GCGGTGAGCA ACAACCTCGA ACGCGCACGG CAGGATTGGG GCAAGCCCGC CACCGATGTG ACTATGCTGC GCGGCAAGCC CATCGAGACC ACCATCGACG CCGCGCGCCT GTATCTCGGC AATTGCGCGT CGTGTCACCA GGCCGATGGA CGCGGCACGC CCGATGGCTA CTACCCGCCG TTGCTGCACA ACTCCACGGT GGGCACGCGG GACACGACCA ACCTCGTGCA GGTGATTTTG TTTGGCATTG AGCGCAAGGC TGGCGACAAG CACATCGGCA TGCCGGCCTT TGCCCGTCAG TTGTCGGACG AGCAGCTTGC CGCCCTCACG AACTACGTCA CGCGCCAGTT TGGTGACCCG GCCACGCCGG AGGTGACTGC CGAAGCCATC GCAAAGCGGC GTTCAGCGAA GTAG
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Protein sequence | MKAIASFSLL LLAGPLANAW AKDTPADTAQ IKRGEYLAIA ADCAACHTAP GGKPFAGGLP MQIPMLGTIY SSNITPDEKT GIGKWTYEEF ERAVRKGVDD DGNNLYPAMP YPSYAKINDA DMRDLYAYFR NGVTAVENRR PRSTIRWPLN MRWPLKLWNL LFLKSEPYTP KSDKSPTWNR GAYLTQGLAH CGTCHTPRGF AMQEKALDER GSGYLAGSTL SGWTAFNITS DPTSGIGAWK PEQLVQYLRT GSVPGVAQAA GPMGEAVQHS FSKMTMQDVQ AIAEYLRTVP AVSNNLERAR QDWGKPATDV TMLRGKPIET TIDAARLYLG NCASCHQADG RGTPDGYYPP LLHNSTVGTR DTTNLVQVIL FGIERKAGDK HIGMPAFARQ LSDEQLAALT NYVTRQFGDP ATPEVTAEAI AKRRSAK
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