Gene Rpic12D_0790 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0790 
Symbol 
ID8018419 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp818519 
End bp819802 
Gene Length1284 bp 
Protein Length427 aa 
Translation table11 
GC content64% 
IMG OID644829568 
ProductGluconate 2-dehydrogenase (acceptor) 
Protein accessionYP_002980763 
Protein GI241662403 
COG category[C] Energy production and conversion 
COG ID[COG2010] Cytochrome c, mono- and diheme variants 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.310202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.354457 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCGA TCGCTTCCTT CTCGCTGCTG TTGCTCGCCG GCCCGCTGGC GAATGCGTGG 
GCGAAGGACA CGCCGGCTGA CACCGCGCAG ATCAAACGCG GCGAATACCT GGCCATTGCG
GCGGACTGCG CAGCCTGCCA TACGGCGCCC GGCGGCAAGC CCTTTGCCGG CGGCTTGCCG
ATGCAGATTC CGATGCTGGG CACGATCTAC AGCAGCAACA TCACGCCCGA TGAAAAGACC
GGCATCGGCA AATGGACCTA CGAAGAATTC GAGCGCGCCG TGCGAAAGGG CGTGGACGAT
GACGGCAACA ACCTGTATCC GGCCATGCCG TATCCGTCGT ACGCCAAGAT CAACGATGCG
GACATGCGCG ATCTCTATGC GTACTTCCGC AACGGCGTGA CGGCGGTGGA AAACCGGCGG
CCGCGTAGCA CGATCCGATG GCCGCTGAAC ATGCGCTGGC CGCTCAAGCT TTGGAACCTT
CTCTTCCTCA AGAGCGAGCC GTACACCCCC AAGAGTGACA AGTCGCCGAC GTGGAATCGC
GGTGCGTACC TCACGCAAGG CCTGGCGCAC TGCGGCACGT GCCATACACC GCGCGGTTTC
GCCATGCAGG AGAAGGCGCT GGACGAGCGC GGCAGCGGCT ATCTGGCTGG CTCGACGCTC
TCGGGCTGGA CGGCGTTCAA CATCACCTCG GACCCGACGA GCGGCATCGG CGCATGGAAG
CCCGAACAGC TCGTGCAATA CCTGCGCACC GGCAGTGTGC CCGGCGTGGC ACAGGCCGCA
GGTCCGATGG GTGAAGCCGT GCAGCACAGC TTTTCGAAGA TGACGATGCA GGACGTCCAG
GCCATCGCCG AATATCTGCG GACCGTGCCC GCGGTGAGCA ACAACCTCGA ACGCGCACGG
CAGGATTGGG GCAAGCCCGC CACCGATGTG ACTATGCTGC GCGGCAAGCC CATCGAGACC
ACCATCGACG CCGCGCGCCT GTATCTCGGC AATTGCGCGT CGTGTCACCA GGCCGATGGA
CGCGGCACGC CCGATGGCTA CTACCCGCCG TTGCTGCACA ACTCCACGGT GGGCACGCGG
GACACGACCA ACCTCGTGCA GGTGATTTTG TTTGGCATTG AGCGCAAGGC TGGCGACAAG
CACATCGGCA TGCCGGCCTT TGCCCGTCAG TTGTCGGACG AGCAGCTTGC CGCCCTCACG
AACTACGTCA CGCGCCAGTT TGGTGACCCG GCCACGCCGG AGGTGACTGC CGAAGCCATC
GCAAAGCGGC GTTCAGCGAA GTAG
 
Protein sequence
MKAIASFSLL LLAGPLANAW AKDTPADTAQ IKRGEYLAIA ADCAACHTAP GGKPFAGGLP 
MQIPMLGTIY SSNITPDEKT GIGKWTYEEF ERAVRKGVDD DGNNLYPAMP YPSYAKINDA
DMRDLYAYFR NGVTAVENRR PRSTIRWPLN MRWPLKLWNL LFLKSEPYTP KSDKSPTWNR
GAYLTQGLAH CGTCHTPRGF AMQEKALDER GSGYLAGSTL SGWTAFNITS DPTSGIGAWK
PEQLVQYLRT GSVPGVAQAA GPMGEAVQHS FSKMTMQDVQ AIAEYLRTVP AVSNNLERAR
QDWGKPATDV TMLRGKPIET TIDAARLYLG NCASCHQADG RGTPDGYYPP LLHNSTVGTR
DTTNLVQVIL FGIERKAGDK HIGMPAFARQ LSDEQLAALT NYVTRQFGDP ATPEVTAEAI
AKRRSAK