Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0765 |
Symbol | |
ID | 8018394 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 795089 |
End bp | 795763 |
Gene Length | 675 bp |
Protein Length | 224 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829543 |
Product | ABC transporter related |
Protein accession | YP_002980738 |
Protein GI | 241662378 |
COG category | [R] General function prediction only |
COG ID | [COG4619] ABC-type uncharacterized transport system, ATPase component |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0339667 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCTGGCCG CCACCCACCT CCAACGCCGC GATGCACGCG CCGGTGTCAC GCTGCTGCAA TCTGCCACGC TTGCTGTGCA GGCAGGCGAC CGCATTGCGC TGACCGGGCC ATCCGGCGCG GGCAAGAGCG TGCTGCTGCG CGCGCTGGCG CTGCTCGATC CGCTCGATGA TGGGCAAGTG ACATGGCATG GCCAAGCGAT CGGCCCGCGC GCGGTTCCGG CCTATCGCTG TCACGTGGCG TACGTGCGCC AGCGCCCAGC GCTGCCGCCC GGTACGGTGG AGGACAACCT GCGCCTGCCC TATCAGCTGC ACGTGCGGCG CCAAAGCACC GGCTTCGATC GGGACGCCGC TATCGCCTTG CTTGTGGGTG CCGAGCGCGA CGCCAGCTTT CTCGACAAAA ACGCCGCCGA TCTTTCCGGC GGTGAAGCAC AGATCGCGGC GCTGGTTCGC ACACTACAGA CACGGCCGAC CGTCCTGCTG CTGGACGAGC CTACGGCGGC CCTTGACCCC GCCTCTGCGC GTGCGGTCGA GGCGCTGTTG CAGCATTGGT TTGCGCAGGC ACCCGAGCGG CATGCGTGGA TGTGGGTGAC ACACGATTCG GCGCAAGCAG AGCGCATCGG CCGGCAGCAT TGGAAGATGG TTGCCGGGCA ACTCGACACG GGGCTCGAGC GATGA
|
Protein sequence | MLAATHLQRR DARAGVTLLQ SATLAVQAGD RIALTGPSGA GKSVLLRALA LLDPLDDGQV TWHGQAIGPR AVPAYRCHVA YVRQRPALPP GTVEDNLRLP YQLHVRRQST GFDRDAAIAL LVGAERDASF LDKNAADLSG GEAQIAALVR TLQTRPTVLL LDEPTAALDP ASARAVEALL QHWFAQAPER HAWMWVTHDS AQAERIGRQH WKMVAGQLDT GLER
|
| |