Gene Rpic12D_0765 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0765 
Symbol 
ID8018394 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp795089 
End bp795763 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content68% 
IMG OID644829543 
ProductABC transporter related 
Protein accessionYP_002980738 
Protein GI241662378 
COG category[R] General function prediction only 
COG ID[COG4619] ABC-type uncharacterized transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0339667 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGCCG CCACCCACCT CCAACGCCGC GATGCACGCG CCGGTGTCAC GCTGCTGCAA 
TCTGCCACGC TTGCTGTGCA GGCAGGCGAC CGCATTGCGC TGACCGGGCC ATCCGGCGCG
GGCAAGAGCG TGCTGCTGCG CGCGCTGGCG CTGCTCGATC CGCTCGATGA TGGGCAAGTG
ACATGGCATG GCCAAGCGAT CGGCCCGCGC GCGGTTCCGG CCTATCGCTG TCACGTGGCG
TACGTGCGCC AGCGCCCAGC GCTGCCGCCC GGTACGGTGG AGGACAACCT GCGCCTGCCC
TATCAGCTGC ACGTGCGGCG CCAAAGCACC GGCTTCGATC GGGACGCCGC TATCGCCTTG
CTTGTGGGTG CCGAGCGCGA CGCCAGCTTT CTCGACAAAA ACGCCGCCGA TCTTTCCGGC
GGTGAAGCAC AGATCGCGGC GCTGGTTCGC ACACTACAGA CACGGCCGAC CGTCCTGCTG
CTGGACGAGC CTACGGCGGC CCTTGACCCC GCCTCTGCGC GTGCGGTCGA GGCGCTGTTG
CAGCATTGGT TTGCGCAGGC ACCCGAGCGG CATGCGTGGA TGTGGGTGAC ACACGATTCG
GCGCAAGCAG AGCGCATCGG CCGGCAGCAT TGGAAGATGG TTGCCGGGCA ACTCGACACG
GGGCTCGAGC GATGA
 
Protein sequence
MLAATHLQRR DARAGVTLLQ SATLAVQAGD RIALTGPSGA GKSVLLRALA LLDPLDDGQV 
TWHGQAIGPR AVPAYRCHVA YVRQRPALPP GTVEDNLRLP YQLHVRRQST GFDRDAAIAL
LVGAERDASF LDKNAADLSG GEAQIAALVR TLQTRPTVLL LDEPTAALDP ASARAVEALL
QHWFAQAPER HAWMWVTHDS AQAERIGRQH WKMVAGQLDT GLER