Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0762 |
Symbol | |
ID | 8018391 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 792906 |
End bp | 793808 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829540 |
Product | Taurine dioxygenase |
Protein accession | YP_002980735 |
Protein GI | 241662375 |
COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG2175] Probable taurine catabolism dioxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.059685 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCGACG CCGTTGTTAC CCCGGATGCT CCTGCCGTCC ACACAGCCCG CTTCCACATT CGCCGCCTGC CCGACGCGCC GCTTGGCGCA GAGGTTCTCG GCCTGGGCGA TGCATCCGAC TTGTCTGACG CGGACATCGC CGCCATCCGC CAAGCGTGGC TCGCGCATGA CGGCCTGCTC GTTTTCCGTG ACGTCGAATT CACGCCGCAG GCGCAAGTTG CCTTCAGCCG CCGCTTCGGC CCGCAGCAGG TGCATGTGCT GAACCAGTTT CATCTGAGCG GCTATCCGGA AATCCTGGTC GTTTCCAACG TGGTTGAGAA CGGCAAGCCG ATCGGCCTGG GCGATGCAGG GCGGGATTGG CATTCAGACC TGTCGTACAA GCCGCTGCCG AGCCTCGGTT CGATGCTGCT CACGCGCGAG TTGCCGGAAG AGGGCGGCGA TACGCTGTTC GCCAACATGG TGCGCGCCTA TGAAACGCTG CCGGCCAATC TCAAGCGCGT CATCGAAGGC CGCCGTGCGG TGCATTCGTA TGTGTACCGC TATGACCGAC TGCGCGCGCT GTCGACCTGG CGTCCGCCGC TCACGCAAGC GCAGCGCGAC GCCGTGCCGC CGGTCGATCA CCCCGTTGTG CGCACGCATC CGGAAACGGG CAAGCGTGCG CTCTTCGTCA ACGAGGGCTT CACCTCGCAC ATCATCGGCT TGCCGGAAGA CGAAAGCACC AGCGTGCTGG AGCAGCTCTT CGCCCACAGC GTCCGCGCCG ACAACGTCTA CACGCACCAG TGGCGCCCCG GCGACATGCT GTTCTGGGAT AACCGCTCCA CCATCCACTT TGCGCCCGGC TGCCCAGACA AGTATCGGCG CACGCTGCAT CGCACGACCA TCGAAGGCGA CGTGCCGGCT TAG
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Protein sequence | MSDAVVTPDA PAVHTARFHI RRLPDAPLGA EVLGLGDASD LSDADIAAIR QAWLAHDGLL VFRDVEFTPQ AQVAFSRRFG PQQVHVLNQF HLSGYPEILV VSNVVENGKP IGLGDAGRDW HSDLSYKPLP SLGSMLLTRE LPEEGGDTLF ANMVRAYETL PANLKRVIEG RRAVHSYVYR YDRLRALSTW RPPLTQAQRD AVPPVDHPVV RTHPETGKRA LFVNEGFTSH IIGLPEDEST SVLEQLFAHS VRADNVYTHQ WRPGDMLFWD NRSTIHFAPG CPDKYRRTLH RTTIEGDVPA
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