Gene Rpic12D_0731 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0731 
Symbol 
ID8018358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp762815 
End bp763489 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content65% 
IMG OID644829507 
ProductexsB protein 
Protein accessionYP_002980704 
Protein GI241662344 
COG category[R] General function prediction only 
COG ID[COG0603] Predicted PP-loop superfamily ATPase 
TIGRFAM ID[TIGR00364] exsB protein 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.372152 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.140663 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAC GCGCCATCGT CCTGCTCTCC GGCGGGCTGG ACTCTGCCAC CGTGCTCGCC 
ATGGCCAATG CGGACGGTTT TGAGACTTAC GCGCTGTCGA TGCGCTACGG CCAGCGCCAT
TCGTCCGAGT TGGAAGCAGC CAAGAAAGTG GCGGCGGCGC TCGGCGCAGT GCGACATGAA
ATCGTCGATC TGGACTTGCG CAAGTTCGGG GGCTCCGCGT TGACGGACGA TGCGCTCGAC
GTGCCGACTG ACGGCGCGCA GACGGGTATC CCGATCACGT ATGTGCCGGC GCGCAACACG
ATCATGCTGT CGCTGGCGCT TGGCTGGGCC GAGGCGGTCG GCGCACGCGA CCTGTTCTTT
GGCGCGAATG CCGTGGACTA CTCCGGCTAT CCGGATTGCC GCCCCGAATA CGTTGCCGCT
TACGAAACGC TCGCCAACCT GGCGACAAAG GCCGGTGTGG AAGGCGAGCG CATCCGAGTG
AACGCACCCA TCATCGACAT GACCAAGGCG GAAATCATCC AGGCCGGTGT GCGGCTGGGC
GTGGACTACG GCCTGACCGT GTCGTGCTAC AAGGCCGACG ACGCCGGCCG CGCTTGCGGC
GTGTGCGATT CGTGCCGCAT CCGCAAGGCC GGCTTTGAAG CCGCGGGCGT GCCCGATCCC
ACCCGCTATG TCTGA
 
Protein sequence
MKKRAIVLLS GGLDSATVLA MANADGFETY ALSMRYGQRH SSELEAAKKV AAALGAVRHE 
IVDLDLRKFG GSALTDDALD VPTDGAQTGI PITYVPARNT IMLSLALGWA EAVGARDLFF
GANAVDYSGY PDCRPEYVAA YETLANLATK AGVEGERIRV NAPIIDMTKA EIIQAGVRLG
VDYGLTVSCY KADDAGRACG VCDSCRIRKA GFEAAGVPDP TRYV