Gene Rpic12D_0730 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0730 
Symbol 
ID8018357 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp761866 
End bp762651 
Gene Length786 bp 
Protein Length261 aa 
Translation table11 
GC content63% 
IMG OID644829506 
Producttol-pal system protein YbgF 
Protein accessionYP_002980703 
Protein GI241662343 
COG category[S] Function unknown 
COG ID[COG1729] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR02795] tol-pal system protein YbgF 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.18828 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.147951 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACGA TGATGAAACA GCGCGCTTAT GGGGCCATGC GTCGGGCCGT CCTGCTGGCG 
ACGCTCGTCG CGGGTGGCGC CCTCACCATG GCCGGCCCGG CGGCAGCGGG GGTGTTTGAC
GACGATGAGG CGCGCCGCGC CATCATCGAC ATGCGCGACA AGTTCAACAA CTTCCAGTCG
ACGGCTGCCC AGCGCATCGA TCAGAACAGC AAGAACCTGA TCGACGCGCA AAACCAGATC
GAGACACTCA AATCGGAAGT GGCGCGCCTG CGCGGGCAGA ACGAAGTCCT GCAGAACAGC
GTCGATACGT TGACCAAGCA GCAAAAGGAT TACTACGCCG ACCTCGATGC GCGCCTGAAG
AAGTTCGAGC CGCAGCAAGC CACGGTGGAT GGCCGCGAAG GCATGGTCCA GCCGAACGAG
AAGCCGGAAT ACGACGCTGC GCTCAAGGCG TTCCAGGGCG GGGACTTCAA GGGCGCAGGC
AATCAGTTCT CGGCGTTCGT GAAGAAGTAT CCCCAAAGCC CGTATCTGCC GCTCGCGCAG
TTCTGGCTAG GCAACGCGCT CTATGCGCAG CGCGACTACA AGGGCTCGAG CTACGTGCTC
GAGAACATGG CGCGCAGCAA CCCGCAGCAT CCGAAGGCGC CCGATGCGCT GCTGCAGGTG
GCGACCAACC AGGGCGAGTC TGGCCAGAAG GCGGCCGCAC GCAAGACGCT GGAATCGGTG
GTCTCTCAGT ATCCCGGCAC CGAGCAGGCA AAGACGGCGC AAAGCCGTCT GAAGTCGATG
CGCTGA
 
Protein sequence
MNTMMKQRAY GAMRRAVLLA TLVAGGALTM AGPAAAGVFD DDEARRAIID MRDKFNNFQS 
TAAQRIDQNS KNLIDAQNQI ETLKSEVARL RGQNEVLQNS VDTLTKQQKD YYADLDARLK
KFEPQQATVD GREGMVQPNE KPEYDAALKA FQGGDFKGAG NQFSAFVKKY PQSPYLPLAQ
FWLGNALYAQ RDYKGSSYVL ENMARSNPQH PKAPDALLQV ATNQGESGQK AAARKTLESV
VSQYPGTEQA KTAQSRLKSM R