| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0697 |
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| Symbol | |
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| ID | 8018323 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 727012 |
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| End bp | 728868 |
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| Gene Length | 1857 bp |
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| Protein Length | 618 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829472 |
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| Product | integrase family protein |
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| Protein accession | YP_002980670 |
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| Protein GI | 241662310 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACTCT CAGACTTGGT GGTCCGCCAA GCCAAGGCCA CCGGCAAGGC TTACACCCTT
CCAGACATCG ATGGTCTCTC CCTGGCCGTG ACGACCACGG GTAGCAAGAG CTGGCACTTC
CGTTACTACT GGATGAAGGA GCCCAAGCGC ATGTCGCTGG GCACCTATCC CGAGGTGTCC
CTTCGTGAGG CACGCGCCCT GCGTGACGAG GCACGCGCCT TGGTGGCCAA GGACATCAAC
CCGCGTCTTC ACCGCAAGCA AAAGCGCGCC GCGGTCAAAC TCGCTGGTGA AAACACCTTC
GAGGCGATCT ACAAGAAGTG GCTTGCACAC CGCGAACTCG GCCTCAAGAA GGGCCGGCAG
ACCACGCTCT CGATCCTCCC TCGCGTCTTC GCCAAGGATG TGCTGCCCTT GCTGGGCAAG
CGCTCGATCT ACGACATCAA ACGCCCTGAC TTGCTGGAAG TGATCGCCAG GATTGAGCGG
CGCAAGGCGC TCTCCGTCGC CGAGAAAGTC AGGACGTGGT TCAACCAGAT GTTCCGCTAC
GCGCTGGTGG TCGTGCCGGG CTTAGAGCAG AACCCGGCCT CCGACCTCGA CGTGGTGGCG
CTGCCGCTGC CCCCCGTGAA TCACAACCCG TTCCTGCGCA TGGCCGAGTT GCCGAAGCTG
CTGCAGCGCT TGCGCAAGTA TCGTGGCCGG CTGCAGACCC AGCTCGGTCT GCGGTTGCTG
CTATTCACCG GCGTGCGCAC GGGCGAGCTG CGCCTGGCGA CGCCGGATCA GTTCGACCTC
GATCGGGGTC TGTGGATCAT CCCGCCCGAG GTCGTGAAGC AGCTCCAGGT GGACATGCGC
AGGAAGCGCC AGTTGCCCAA GGACATTCCA CCCTACATCG TGCCGCTATC GGTGCAAGCC
ATCGAGATCG TCCGGCACCT ACTGGAACAG TTCAAACCGG CCCAGCACTA TCTGTTCCGG
CACGACAGCG AGTTGAAGAA GCGCATGAGC GAGAACACGC TCAACGGTGC GCTCAAGCGC
ATGGGCTATC GCGACCTGCT GACCGGGCAC GGCATCCGGG GCACGATGTC CACCGCGCTC
AACGAGATCG GCTACCCGAA GGTGTGGGTG GATGCGCAGC TCTCGCACGT CGATCCCAAC
AAGGTCAGCG CCACCTACAA CCACGCCGAG TACGTCGAGC AGCGGCGGCG GATGATGCAG
GACTGGGCCG ACCGGCTCGA TCTCTTCGAG CAGAACATGG TCGAAGCAGC GAGCATGCCG
CTCACCATTC ATCTGGAGGG CGTACCCGTC CTCTCGGACG AGGAAGCCGC GAGCGCGCCA
CCCAAGGCAG CGGCCACGTC GGCGCCGCTC CTGATCGTGA CCAAGCCGGG AGACGCGATG
CCACTGGTGT CGGCCGAGAC GCATCGGCTG CCCGCAGTGC CGTTGCCGCG CTCCGTCATG
GAGGAACCGC TGTCCGACAT TCAGCGCCAG CGGATGGAAC TGGTCGATGT CTTCGAGGCA
CCGCACAACC TGCCAGTCGC CGAGTACGCG AAGATGGCGG GCAAGTCCCG CCGGTGGATC
AGCTACGAGA TCAAGGCCGG CAACCTGCTG GCGCTGAACC TGGGCAACCG TGGTCAGCGC
GTGCCGGATT GGCATCTCGA TCCGGTCAAG CACGCGCTGA TCCAGGCGGT CCTCAAGCTG
ACCAGGGGCG CCGACCCTTG GCAGATCTAC AACGCGCTCC TGCAGCCGCG CGCGATGCTG
CGCGGCCGCT CGGCCCTGGA AAGCGTCAGC GCCACGAATC TCGACAAGAT CATCATGGCG
GTGAGCACGA CGGTGAAGGA AAGCGAGTGG TCCCCGCAGC AGGTGGCGTT TGCGTAG
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| Protein sequence | MALSDLVVRQ AKATGKAYTL PDIDGLSLAV TTTGSKSWHF RYYWMKEPKR MSLGTYPEVS
LREARALRDE ARALVAKDIN PRLHRKQKRA AVKLAGENTF EAIYKKWLAH RELGLKKGRQ
TTLSILPRVF AKDVLPLLGK RSIYDIKRPD LLEVIARIER RKALSVAEKV RTWFNQMFRY
ALVVVPGLEQ NPASDLDVVA LPLPPVNHNP FLRMAELPKL LQRLRKYRGR LQTQLGLRLL
LFTGVRTGEL RLATPDQFDL DRGLWIIPPE VVKQLQVDMR RKRQLPKDIP PYIVPLSVQA
IEIVRHLLEQ FKPAQHYLFR HDSELKKRMS ENTLNGALKR MGYRDLLTGH GIRGTMSTAL
NEIGYPKVWV DAQLSHVDPN KVSATYNHAE YVEQRRRMMQ DWADRLDLFE QNMVEAASMP
LTIHLEGVPV LSDEEAASAP PKAAATSAPL LIVTKPGDAM PLVSAETHRL PAVPLPRSVM
EEPLSDIQRQ RMELVDVFEA PHNLPVAEYA KMAGKSRRWI SYEIKAGNLL ALNLGNRGQR
VPDWHLDPVK HALIQAVLKL TRGADPWQIY NALLQPRAML RGRSALESVS ATNLDKIIMA
VSTTVKESEW SPQQVAFA
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