Gene Rpic12D_0611 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0611 
Symbol 
ID8018237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp645483 
End bp646595 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID644829390 
ProductNADH:flavin oxidoreductase/NADH oxidase 
Protein accessionYP_002980588 
Protein GI241662228 
COG category[C] Energy production and conversion 
COG ID[COG1902] NADH:flavin oxidoreductases, Old Yellow Enzyme family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.316093 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTC TCTTCCAGCC TTTCTCCCTG CGCGGTCTCA CGCTTGAGAA CCGCATCGTC 
ATTTCGCCGA TGTGCCAGTA CTCGGCCGAC AACGGCCAAG CCACGGCGTG GCACCACACG
CATCTGGGCA GCCTGTCGCT TTCGGGCGCC GGATTGCTGA TGATCGAGGC GACCGCGGTG
TCGCCAGAAG GCCGCATCAC GAACGGCTGC CTGGGTTTGT GGGACGACGC GACCGAAGCC
GCGCTTGAGC GCACGCTGGC TGCCATTCGC CAGAATGCGC TGGTGCCGAT CGGCATGCAG
ATCGCGCACG CGGGCCGCAA GGCTTCGAGC GCTCGGCCTT GGGAAGGCGG AGCGTTGCTG
GCGCTCGACG CAGGCGGTTG GGAAACGATG GGGCCGTCCG CGTTGCCGCA GCGCCCCGAG
GAGCGCGCCC CGCGCGAAAT GACCGATGCA GACCTCGCCC GCGTACGCGA TCAGTTCGTC
GATACCGCTC GCCGCGCTGT GCGGCTGGGG CTAGCGGCCA TCGAGCTGCA CGCCGCACAT
GGCTATCTCC TGCACGAATT TCTGTCGCCG ATTGCCAATC AGCGCACCGA TGCCTATGGC
GGTTCGCGTG AGAACCGCAT GCGTTATCCG CTGGAGATTT TCGATGCGGT GCGCGCAGTG
GTGCCGGACA ACATCCCCGT GGGCGTGCGC GTGTCGGCCA CCGATTGGGT GGAGGGCGGC
TGGACGCCGG AAGATTCGGT GGCGTTTGCG CAGGCGCTGC GTGCCCGCGG CTGCGATTGG
ATCGATGCGT CGTCGGGCGG TGTGTCGCCG CTGCAGCAGA TTCCGCTGTC GACGGGCTAT
CAGGTGCCTT TTGCCGAGAA GATCCGCAAC GAAGCCGACA TCCCGACCAT CGCCGTCGGC
CTCATCAACG AAGCGCATGA GGCTGAGGCC ATTATTGCGC AAGGGCGTGC GGACTTGGTC
GCTGTCGGCC GGGCGTTCCT CTACAACCCG CACTGGGCCT GGGCGGCCGC CGCTGAGCTG
GGCGCGACGG TCAAGGCACC TCCGCAATAC TGGCGCGCCT TCCCGCGCCA CGCCAAGAAC
CTCTTCGGCG ATACGCATTT CGGCGCACGC TGA
 
Protein sequence
MSALFQPFSL RGLTLENRIV ISPMCQYSAD NGQATAWHHT HLGSLSLSGA GLLMIEATAV 
SPEGRITNGC LGLWDDATEA ALERTLAAIR QNALVPIGMQ IAHAGRKASS ARPWEGGALL
ALDAGGWETM GPSALPQRPE ERAPREMTDA DLARVRDQFV DTARRAVRLG LAAIELHAAH
GYLLHEFLSP IANQRTDAYG GSRENRMRYP LEIFDAVRAV VPDNIPVGVR VSATDWVEGG
WTPEDSVAFA QALRARGCDW IDASSGGVSP LQQIPLSTGY QVPFAEKIRN EADIPTIAVG
LINEAHEAEA IIAQGRADLV AVGRAFLYNP HWAWAAAAEL GATVKAPPQY WRAFPRHAKN
LFGDTHFGAR