| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0549 |
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| Symbol | |
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| ID | 8018175 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 581590 |
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| End bp | 582441 |
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| Gene Length | 852 bp |
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| Protein Length | 283 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644829328 |
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| Product | Flp pilus assembly protein CpaB |
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| Protein accession | YP_002980526 |
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| Protein GI | 241662166 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3745] Flp pilus assembly protein CpaB |
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| TIGRFAM ID | [TIGR03177] Flp pilus assembly protein CpaB |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAAACC TGCGCATCCT TTCCATGCTG CTCATTGCCA CGATTGCCGC GCTTGCGGCG
GTGGCCTTCG CGTCGCGCTG GCTGACGCAG CAAAGCGGCA GCGGCATCAC CAAGATCGCG
GTCGCGGCGA CGGACATCGA TCTGGGCCAG CGCCTGTCGC CCGAGGCCAT CAAGCTGGTC
GATTGGCCAG CCTCCAGCCT GCCCCCGGGG GCGATCAACG ACCCGCACGC GCTGGATGGC
CGCGTTGTGC GCGCCAGCCT CACGCGCGGC GAGCCGGTGC TCGACTCCAA GCTGACGCCG
GTCGGGACAG CAGGCGGTCT GTCAGCCGTG ATCGCCGAAG GCAAGCGCGC GATCACCGTA
CGGGTCAATG ACGTGGTGGG CGTGGCGGGC TTCGCATTGC CGGGCAGCTA CGTCGACATC
ATCGTCAACA CGCAGCAGGA CTCCAGGGAA GCCAAGCCTG GCGCCGATCG CAATGACCAG
TCGATCTCGA AGATCGTGCT GGAAAAGATT CTCGTGCTGG CTGTGGCCCA GGAGGTCAAC
CGCGACGACA CCAAGCCCAA GGTCGTCAAT GCCGTCACGC TGGAAGTCAC GCCGGAGCAG
GCCGAGAAGA TCGATCTGGC ACGCAGCGTC GGCAATCTCT CGCTGGTATT GCGCAACCAA
GTGGACTCGC AGCATGACGT CACTGCCGGC GCCACCAAGA GCACGCTCCT CAAAGAGCCC
GTCGTGAGCA CGGCCGTGGC GGTGCCAGTG GTGAAGACGG TGCAGATCGT GCATCGCGTG
GCCGAGCGTC GGTCCGCAGG CAACTGCGTG GGCGTGATCA ACGGCGTGCA GCACAGCCAA
GAGTGCTTCT GA
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| Protein sequence | MKNLRILSML LIATIAALAA VAFASRWLTQ QSGSGITKIA VAATDIDLGQ RLSPEAIKLV
DWPASSLPPG AINDPHALDG RVVRASLTRG EPVLDSKLTP VGTAGGLSAV IAEGKRAITV
RVNDVVGVAG FALPGSYVDI IVNTQQDSRE AKPGADRNDQ SISKIVLEKI LVLAVAQEVN
RDDTKPKVVN AVTLEVTPEQ AEKIDLARSV GNLSLVLRNQ VDSQHDVTAG ATKSTLLKEP
VVSTAVAVPV VKTVQIVHRV AERRSAGNCV GVINGVQHSQ ECF
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