Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0500 |
Symbol | |
ID | 8018126 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 529869 |
End bp | 530591 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644829280 |
Product | transcriptional regulator, GntR family |
Protein accession | YP_002980478 |
Protein GI | 241662118 |
COG category | [K] Transcription |
COG ID | [COG1802] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.162166 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.780963 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCGCGTC CGATCAAGCT GGTTTCCGGT TCCGCCCAAA CCGCGCCGGC ATCTGCACCG TTTGCCGTCG AACCTGCCGC GCATGCGCCC AAGGGCGCCG CCATGCGTGA ACTCGCCTAC AACGAGATCA AGCGCCGCAT CATGGCGTGC GAATTCCGCC CCGGCGAGCC GCTGAACGAA GCGCAGCTCG GCGCGCTGCT GGGGCTGGGC CGCACGCCCA TCCACCAGGC GCTGCATCGG TTGGAGGTGG AGGGGCTGGT GCAGATCCTG CCGCGCAAGG GCGTGCTGGT GACGCCACTG TCGCTCAACG ACGTGCTCGA CATGATCGAG GTGCGCGCCA CCAACGAGAT CCTCTGCGTA ACGCTGGCCG CCGAGCGTGC CCACCCGGCC GATTTCGAGG CCATGCGCGC CATCGTCGAA GCATCGCCCG CGCTGATCGA GCACCGCGAC ATTGCCGCGC TGGCCGCGCT GGACCTCAAG TTCCACCTCG CCATTTCCGC GGCCTCGCGC AACCGCGTGC TGGCCGAATT GCTGCGCGGC CTGCACGAGA AGCAGGCGCG CTTCTGGTTC CTGTCGCTGT CAGAGCCGCA ACACCTGCAG AACGTGTACG ACGAGCACCT TGCCGTGCTC GATGCGCTGG AGCGCCGTGA TGTGCCTGCT GCACGCGAAG CCATTCGCGA GCACATCGAC GAATTCCGCC GCACGATCAT CCGCACGCTC TGA
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Protein sequence | MSRPIKLVSG SAQTAPASAP FAVEPAAHAP KGAAMRELAY NEIKRRIMAC EFRPGEPLNE AQLGALLGLG RTPIHQALHR LEVEGLVQIL PRKGVLVTPL SLNDVLDMIE VRATNEILCV TLAAERAHPA DFEAMRAIVE ASPALIEHRD IAALAALDLK FHLAISAASR NRVLAELLRG LHEKQARFWF LSLSEPQHLQ NVYDEHLAVL DALERRDVPA AREAIREHID EFRRTIIRTL
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