Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0449 |
Symbol | |
ID | 8018075 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 474474 |
End bp | 476204 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 644829229 |
Product | SSS sodium solute transporter superfamily |
Protein accession | YP_002980427 |
Protein GI | 241662067 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.254616 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAGAAGA TGCTTTCGAT CCTGCTGGTG GCGCTACTGG CCGCTGGCGC CTGCGGAGCG GCTCTGGCTG CCGGCGGCGA TGTCGGACAG ACCGCCAAGC AGGAAACCAA CACCACGGCC ATCGTTCTGT TTGCACTGTT TGTGGCCGGC ACGCTGTGGA TCACGAAGTG GGCGGCCAAG CGTACGCGCT CCGCGGCCGA TTTCTACACG GCGGGCGGCG GCATCACCGG CTTCCAGAAT GGCCTGGCCA TTTCGGGCGA CTACATGTCG GCAGCGTCCT TCCTCGGTAT TTCCGCGGCC GTGATGACCT CCGGCTACGA CGGCCTGATC TACTCCATCG GCTTTCTGGT CGGCTGGCCG ATCATCACGT TCCTGATGGC CGAGCGGCTG CGCAATCTTG GCAAGTTCAC CTTTGCAGAC GTGGCAGGCT ACCGGTTCGA GCAAGGCCCG ATCCGCAGCT TTGCCGCCGT TGGCACGCTG GTGGTGGTGG CGTTCTATCT GATCGCTCAG ATGGTGGGTG CAGGCCAGCT CATCAAACTG CTGTTCGGGC TGGATTACTG GATCGCGGTG GTCATCGTCG GTGCGTTGAT GATGGTCTAC GTGCTCTTCG GCGGTATGAC CGCAACCACC TGGGTGCAGA TCATCAAGGC GTGCATGCTG CTGGCTGGCG TGACGTTCAT GGCCATCATG GTGCTGGCGC AGTACGGTTT CAGTCTGGAG GCGTTGTTCG CCAAGGCTGT GCAGGTCAAG ACCGCCATTG CAGCCAATGC CGGCAAATCG CCCGATGAGG CCGCCAAGAT CGGTCTGTCG GTGATGGCGC CGGGTGGCTT CATCAAGGAT CCGATCTCGG CCATCTCGTT CGGCATGGCG CTGATGTTCG GCACCGCCGG TCTGCCTCAC ATCCTGATGC GTTTCTTCAC GGTGCCCGAT GCCAAGGAAG CACGCAAATC GGTCTTCTGG GCAACTACCT GGATCGGCTA CTTCTACATC CTGATCTTTA TCATCGGCTT TGGTGCGATC ACGCTGGTGT TGACGAACCC CGAACTGTCC GACGTGGCCA AGGGTGTCAT CAAGGGCGGC GCGGGCACGG CCAACATGGC TGCGGTACTG GTGGCCAAGA CTGTGGGCGG CGACGTGTTC TACGGCTTCA TCTCGGCCGT GGCGTTTGCC ACGATTCTCG CGGTGGTAGC AGGGCTCACG CTGTCGGGTG CATCGGCGGT GTCGCATGAT CTTTACGCCA CGGTCTTCAA GCACGGCAAG GCCAACAGCG CCGACGAGCT GAAGGTCTCG CGCATCACCA CGCTGGTGCT GGGCGTGATC GCCGTGCTGC TGGGCATCGC TTTCGAGAAG CAGAACATCG CGTTCATGGT GTCGCTGGCG TTTGCGGTGG CGGCATCGGC CAACTTTCCG GTGTTGTTCC TCTCGATGCT GTGGAAGGGC TGTACCACGC GTGGTGCGGT TATCGGCGGG TTCCTGGGGC TGATCTCGTC AGTGGGTCTG ACGATCGTTT CGCCGTCGGT GTGGGAGGCC ACGCTCGGCT ATCCGAAGGG CTCGGCGTGG TTCCCGTACA CGTCGCCCGC GCTGTTCTCG ATGACGATCG GCTTCGTGGG CGTGTGGCTG TTCTCGGTGC TGGACAGCAG CGTTCGCGCC AAGAACGAAA AGGCGTCGTT TGCCGCGCAA CAGGTCCGCT CGGAAACGGG CCTCGGTGCG GCTGGCGCAT CGGGCCACTG A
|
Protein sequence | MKKMLSILLV ALLAAGACGA ALAAGGDVGQ TAKQETNTTA IVLFALFVAG TLWITKWAAK RTRSAADFYT AGGGITGFQN GLAISGDYMS AASFLGISAA VMTSGYDGLI YSIGFLVGWP IITFLMAERL RNLGKFTFAD VAGYRFEQGP IRSFAAVGTL VVVAFYLIAQ MVGAGQLIKL LFGLDYWIAV VIVGALMMVY VLFGGMTATT WVQIIKACML LAGVTFMAIM VLAQYGFSLE ALFAKAVQVK TAIAANAGKS PDEAAKIGLS VMAPGGFIKD PISAISFGMA LMFGTAGLPH ILMRFFTVPD AKEARKSVFW ATTWIGYFYI LIFIIGFGAI TLVLTNPELS DVAKGVIKGG AGTANMAAVL VAKTVGGDVF YGFISAVAFA TILAVVAGLT LSGASAVSHD LYATVFKHGK ANSADELKVS RITTLVLGVI AVLLGIAFEK QNIAFMVSLA FAVAASANFP VLFLSMLWKG CTTRGAVIGG FLGLISSVGL TIVSPSVWEA TLGYPKGSAW FPYTSPALFS MTIGFVGVWL FSVLDSSVRA KNEKASFAAQ QVRSETGLGA AGASGH
|
| |