Gene Rpic12D_0449 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0449 
Symbol 
ID8018075 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp474474 
End bp476204 
Gene Length1731 bp 
Protein Length576 aa 
Translation table11 
GC content62% 
IMG OID644829229 
ProductSSS sodium solute transporter superfamily 
Protein accessionYP_002980427 
Protein GI241662067 
COG category[R] General function prediction only 
COG ID[COG4147] Predicted symporter 
TIGRFAM ID[TIGR00813] transporter, SSS family 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.254616 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGAAGA TGCTTTCGAT CCTGCTGGTG GCGCTACTGG CCGCTGGCGC CTGCGGAGCG 
GCTCTGGCTG CCGGCGGCGA TGTCGGACAG ACCGCCAAGC AGGAAACCAA CACCACGGCC
ATCGTTCTGT TTGCACTGTT TGTGGCCGGC ACGCTGTGGA TCACGAAGTG GGCGGCCAAG
CGTACGCGCT CCGCGGCCGA TTTCTACACG GCGGGCGGCG GCATCACCGG CTTCCAGAAT
GGCCTGGCCA TTTCGGGCGA CTACATGTCG GCAGCGTCCT TCCTCGGTAT TTCCGCGGCC
GTGATGACCT CCGGCTACGA CGGCCTGATC TACTCCATCG GCTTTCTGGT CGGCTGGCCG
ATCATCACGT TCCTGATGGC CGAGCGGCTG CGCAATCTTG GCAAGTTCAC CTTTGCAGAC
GTGGCAGGCT ACCGGTTCGA GCAAGGCCCG ATCCGCAGCT TTGCCGCCGT TGGCACGCTG
GTGGTGGTGG CGTTCTATCT GATCGCTCAG ATGGTGGGTG CAGGCCAGCT CATCAAACTG
CTGTTCGGGC TGGATTACTG GATCGCGGTG GTCATCGTCG GTGCGTTGAT GATGGTCTAC
GTGCTCTTCG GCGGTATGAC CGCAACCACC TGGGTGCAGA TCATCAAGGC GTGCATGCTG
CTGGCTGGCG TGACGTTCAT GGCCATCATG GTGCTGGCGC AGTACGGTTT CAGTCTGGAG
GCGTTGTTCG CCAAGGCTGT GCAGGTCAAG ACCGCCATTG CAGCCAATGC CGGCAAATCG
CCCGATGAGG CCGCCAAGAT CGGTCTGTCG GTGATGGCGC CGGGTGGCTT CATCAAGGAT
CCGATCTCGG CCATCTCGTT CGGCATGGCG CTGATGTTCG GCACCGCCGG TCTGCCTCAC
ATCCTGATGC GTTTCTTCAC GGTGCCCGAT GCCAAGGAAG CACGCAAATC GGTCTTCTGG
GCAACTACCT GGATCGGCTA CTTCTACATC CTGATCTTTA TCATCGGCTT TGGTGCGATC
ACGCTGGTGT TGACGAACCC CGAACTGTCC GACGTGGCCA AGGGTGTCAT CAAGGGCGGC
GCGGGCACGG CCAACATGGC TGCGGTACTG GTGGCCAAGA CTGTGGGCGG CGACGTGTTC
TACGGCTTCA TCTCGGCCGT GGCGTTTGCC ACGATTCTCG CGGTGGTAGC AGGGCTCACG
CTGTCGGGTG CATCGGCGGT GTCGCATGAT CTTTACGCCA CGGTCTTCAA GCACGGCAAG
GCCAACAGCG CCGACGAGCT GAAGGTCTCG CGCATCACCA CGCTGGTGCT GGGCGTGATC
GCCGTGCTGC TGGGCATCGC TTTCGAGAAG CAGAACATCG CGTTCATGGT GTCGCTGGCG
TTTGCGGTGG CGGCATCGGC CAACTTTCCG GTGTTGTTCC TCTCGATGCT GTGGAAGGGC
TGTACCACGC GTGGTGCGGT TATCGGCGGG TTCCTGGGGC TGATCTCGTC AGTGGGTCTG
ACGATCGTTT CGCCGTCGGT GTGGGAGGCC ACGCTCGGCT ATCCGAAGGG CTCGGCGTGG
TTCCCGTACA CGTCGCCCGC GCTGTTCTCG ATGACGATCG GCTTCGTGGG CGTGTGGCTG
TTCTCGGTGC TGGACAGCAG CGTTCGCGCC AAGAACGAAA AGGCGTCGTT TGCCGCGCAA
CAGGTCCGCT CGGAAACGGG CCTCGGTGCG GCTGGCGCAT CGGGCCACTG A
 
Protein sequence
MKKMLSILLV ALLAAGACGA ALAAGGDVGQ TAKQETNTTA IVLFALFVAG TLWITKWAAK 
RTRSAADFYT AGGGITGFQN GLAISGDYMS AASFLGISAA VMTSGYDGLI YSIGFLVGWP
IITFLMAERL RNLGKFTFAD VAGYRFEQGP IRSFAAVGTL VVVAFYLIAQ MVGAGQLIKL
LFGLDYWIAV VIVGALMMVY VLFGGMTATT WVQIIKACML LAGVTFMAIM VLAQYGFSLE
ALFAKAVQVK TAIAANAGKS PDEAAKIGLS VMAPGGFIKD PISAISFGMA LMFGTAGLPH
ILMRFFTVPD AKEARKSVFW ATTWIGYFYI LIFIIGFGAI TLVLTNPELS DVAKGVIKGG
AGTANMAAVL VAKTVGGDVF YGFISAVAFA TILAVVAGLT LSGASAVSHD LYATVFKHGK
ANSADELKVS RITTLVLGVI AVLLGIAFEK QNIAFMVSLA FAVAASANFP VLFLSMLWKG
CTTRGAVIGG FLGLISSVGL TIVSPSVWEA TLGYPKGSAW FPYTSPALFS MTIGFVGVWL
FSVLDSSVRA KNEKASFAAQ QVRSETGLGA AGASGH