Gene Rpic12D_0432 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0432 
Symbol 
ID8018057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp452995 
End bp455505 
Gene Length2511 bp 
Protein Length836 aa 
Translation table11 
GC content65% 
IMG OID644829211 
Productacyl-CoA dehydrogenase 
Protein accessionYP_002980410 
Protein GI241662050 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACGA TCTGGATCGT CCTGCTTTGC ATCGGCGCGC TCGCTCTCGC CAGCATGGAA 
GCCTCGGCAG TCGCCTGGCT GATCGCAACG GCGGTGTGGC TGGTCGCCGG TGCTTGGCTG
GGCCTCGTCG GCCCGGTGAT GACAGCGGTG CTCGCCATCG TCTTTGTGCT GCCCGCGCTG
GTGCTTGCGG TCAAGCCGTT GCGCCGGGCA CTCATCACGC GCCCGGTGCT GGCGATGTTC
CGCAAGATCA TGCCGGAGAT GTCGCAGACG GAGCGCGACG CCATTGAAGC TGGCACGGTC
TGGTGGGATG CCGAATTGTT TTCGGGCCGG CCGAACTGGT CGCGTTTGAT GTCTTCCCCG
CCGCCCCGTC TGTCGGCGGA AGAGCAATCC TTCCTCGACA TCGAAACTGA AAAGCTTTGC
GACCTTGCCA ACGATTGGGA AAGCACGCAG ATCTGGCAAG ACCTGTCGCC CGAGGCGTGG
GCCTATGCAA AGCGCGCGGG CTTCCTCGGC ATGATCATCC CGAAGGAATA CGGCGGCAAA
GGCTTCTCGG CGTATGCGCA CTCGCAGGTC ATCATGAAAC TGTCGACGCG CTGCTCCGCT
GCAGCCGTTT CGGTCATGGT GCCCAACTCT CTGGGCCCCG CCGAGCTGCT TCTGCACTAC
GGCACCGAAG CGCAAAAGGA CCATTACCTG CCGCGCCTCG CACGCGGGGA AGAAATCCCC
TGCTTTGCGC TGACCAACGC GTATGCCGGC TCCGATGCCG CCGCCATTCC CGATGTGGGC
GTGGTCTGCC GCGGCATGCA CGAAGGCCGC GAGACCCTTG GCTTTCGCGT GACATGGAGC
AAACGCTACA TCACGCTCGG CCCCATCGCG ACAGTGCTGG GACTGGCCTT CCGCGCAGTC
GATCCGGATG GTTTGCTCGG TGCCGACAAG GAACCCGGCA TCACGTGCGC GCTCATCCCG
ACCAAGCATC CGGGCGTGAA CATCGGCCGC CGCCATTGGC CACTCAATGC GGTGTTCCAG
AACGGCCCCA ATTGGGGCAA GGATGTGTTC ATCCCCATCG ACTGGGTGAT CGGCGGCCGG
GCACAGGTCG GCCGTGGCTG GCGCATGCTG ATGGAATGCT TGGCAGCGGG CCGCGCCATC
TCGCTGCCTT CGTCGAACGT GGGCATGGCC AAGCTGGCCG TGCGCAGCAC CGGCGCGTAC
GCCGCCGTGC GTCGCCAGTT CCGTACCCCC ATCGGCAAGT TCGAAGGGAT CCAGGAAGCG
CTCGGTCGGA TGGGCGGCAA TCTGTACATG ATGGACTCGG CACGGCGTCT GTCCGCGTTG
GCCGTCGACC TGGGTGAAAA GCCTTCAGTC ATCTCCGCCA TTGCCAAATA CCACGTCACC
GAACGTGCGC GCGATGTGGT CACCGACGCG ATGGACATCG TCGGCGGCAA GGGCATCTGC
ATGGGCCCGA ACAACTTCCT GGCGCGCGCG TATCAGCAGG TGCCGATCGC CATCACGGTG
GAAGGCGCGA ACATCATGAC GCGCTGCCTG ATCATCTTCG GGCAGGGCGT GATCCGCTGC
CATCCGTATG TGCTGCGCGA GATGACGGCC GCGCAAGGCA CCGATTCGCC CGAGACGCTG
CGTGCGTTCG ATGCGGCGCT GTTCGGCCAC GGCGCGTTCA TCGCCGGCAA CGTGGTGCGT
GCGTTCTTGC ATGCGCTCTC CGGCGGGCGC GTAGCGAGCG TGCCGGGCAA CGCCGCGCCG
GAAATGCATC GGTATTACCG TGCCGTGAAC CGTTTCTCGA CCGCGCTGGC GCTGCTGTCC
GATGTGTCGA TGTTTACGCT GGGCGGCACG CTCAAGCGCC GCGAGAGCAT CACGGGGCGG
CTTGGCGACA TCCTCTCGCA GATGTACCTG ATCTCGTCCA CGCTCAAGCG CTTTGAAGAT
GAAGGCCGCC CTGCAGAGGA CGCGCCGCTC GTGCATTGGT CGGTGCAGGA CGCGCTGGTG
AAGGCGCACG ATGCGCTCGA CGGCGTGCTG GCCAACTTCC CGAACGCGGG CATCGCGGCG
CTGCTGCGCG CGCTGATCTT CCCGTTCGGT ACGCCGTATC GAAAGCCGTC GGATGCGCTG
GCCGCACAGG TTGCCGAGCT GATGCAGACG CCCGGCGTTG TACGCGATCG CCTGCTTGCC
GACTCGTACT GCCCGACGCC CGAAGTCGAC CCGATCGCCT ATGGCGAAGC GGCCTTCCGC
CTGCAACCGG CCGTGGACGC AATCGAGCAA CGCTTGAAAC CGGCCATCCG GGCAGGCAAG
CTGCCGCCCG TGCCGCAGAG CCTGCCCGAC TTCGAAGCCT GGACGGCGCA AGCCGTCGCA
CAGAACCTCA TCGATGAAAG CGAACGCAAG CAACTGTGCG ACTACGCGCG CTACGGTGAG
CACGCCGTTG CTGTGGATGA CTTCCCGCCC GACTTCAACC TGATGGCCGA CCTGCAGCGC
CGCAAGGATG CGCTCGATGC CCTGCAGACC GCCGAGCGCC GCGCAGCCTG A
 
Protein sequence
MTTIWIVLLC IGALALASME ASAVAWLIAT AVWLVAGAWL GLVGPVMTAV LAIVFVLPAL 
VLAVKPLRRA LITRPVLAMF RKIMPEMSQT ERDAIEAGTV WWDAELFSGR PNWSRLMSSP
PPRLSAEEQS FLDIETEKLC DLANDWESTQ IWQDLSPEAW AYAKRAGFLG MIIPKEYGGK
GFSAYAHSQV IMKLSTRCSA AAVSVMVPNS LGPAELLLHY GTEAQKDHYL PRLARGEEIP
CFALTNAYAG SDAAAIPDVG VVCRGMHEGR ETLGFRVTWS KRYITLGPIA TVLGLAFRAV
DPDGLLGADK EPGITCALIP TKHPGVNIGR RHWPLNAVFQ NGPNWGKDVF IPIDWVIGGR
AQVGRGWRML MECLAAGRAI SLPSSNVGMA KLAVRSTGAY AAVRRQFRTP IGKFEGIQEA
LGRMGGNLYM MDSARRLSAL AVDLGEKPSV ISAIAKYHVT ERARDVVTDA MDIVGGKGIC
MGPNNFLARA YQQVPIAITV EGANIMTRCL IIFGQGVIRC HPYVLREMTA AQGTDSPETL
RAFDAALFGH GAFIAGNVVR AFLHALSGGR VASVPGNAAP EMHRYYRAVN RFSTALALLS
DVSMFTLGGT LKRRESITGR LGDILSQMYL ISSTLKRFED EGRPAEDAPL VHWSVQDALV
KAHDALDGVL ANFPNAGIAA LLRALIFPFG TPYRKPSDAL AAQVAELMQT PGVVRDRLLA
DSYCPTPEVD PIAYGEAAFR LQPAVDAIEQ RLKPAIRAGK LPPVPQSLPD FEAWTAQAVA
QNLIDESERK QLCDYARYGE HAVAVDDFPP DFNLMADLQR RKDALDALQT AERRAA