Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0432 |
Symbol | |
ID | 8018057 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 452995 |
End bp | 455505 |
Gene Length | 2511 bp |
Protein Length | 836 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644829211 |
Product | acyl-CoA dehydrogenase |
Protein accession | YP_002980410 |
Protein GI | 241662050 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACGA TCTGGATCGT CCTGCTTTGC ATCGGCGCGC TCGCTCTCGC CAGCATGGAA GCCTCGGCAG TCGCCTGGCT GATCGCAACG GCGGTGTGGC TGGTCGCCGG TGCTTGGCTG GGCCTCGTCG GCCCGGTGAT GACAGCGGTG CTCGCCATCG TCTTTGTGCT GCCCGCGCTG GTGCTTGCGG TCAAGCCGTT GCGCCGGGCA CTCATCACGC GCCCGGTGCT GGCGATGTTC CGCAAGATCA TGCCGGAGAT GTCGCAGACG GAGCGCGACG CCATTGAAGC TGGCACGGTC TGGTGGGATG CCGAATTGTT TTCGGGCCGG CCGAACTGGT CGCGTTTGAT GTCTTCCCCG CCGCCCCGTC TGTCGGCGGA AGAGCAATCC TTCCTCGACA TCGAAACTGA AAAGCTTTGC GACCTTGCCA ACGATTGGGA AAGCACGCAG ATCTGGCAAG ACCTGTCGCC CGAGGCGTGG GCCTATGCAA AGCGCGCGGG CTTCCTCGGC ATGATCATCC CGAAGGAATA CGGCGGCAAA GGCTTCTCGG CGTATGCGCA CTCGCAGGTC ATCATGAAAC TGTCGACGCG CTGCTCCGCT GCAGCCGTTT CGGTCATGGT GCCCAACTCT CTGGGCCCCG CCGAGCTGCT TCTGCACTAC GGCACCGAAG CGCAAAAGGA CCATTACCTG CCGCGCCTCG CACGCGGGGA AGAAATCCCC TGCTTTGCGC TGACCAACGC GTATGCCGGC TCCGATGCCG CCGCCATTCC CGATGTGGGC GTGGTCTGCC GCGGCATGCA CGAAGGCCGC GAGACCCTTG GCTTTCGCGT GACATGGAGC AAACGCTACA TCACGCTCGG CCCCATCGCG ACAGTGCTGG GACTGGCCTT CCGCGCAGTC GATCCGGATG GTTTGCTCGG TGCCGACAAG GAACCCGGCA TCACGTGCGC GCTCATCCCG ACCAAGCATC CGGGCGTGAA CATCGGCCGC CGCCATTGGC CACTCAATGC GGTGTTCCAG AACGGCCCCA ATTGGGGCAA GGATGTGTTC ATCCCCATCG ACTGGGTGAT CGGCGGCCGG GCACAGGTCG GCCGTGGCTG GCGCATGCTG ATGGAATGCT TGGCAGCGGG CCGCGCCATC TCGCTGCCTT CGTCGAACGT GGGCATGGCC AAGCTGGCCG TGCGCAGCAC CGGCGCGTAC GCCGCCGTGC GTCGCCAGTT CCGTACCCCC ATCGGCAAGT TCGAAGGGAT CCAGGAAGCG CTCGGTCGGA TGGGCGGCAA TCTGTACATG ATGGACTCGG CACGGCGTCT GTCCGCGTTG GCCGTCGACC TGGGTGAAAA GCCTTCAGTC ATCTCCGCCA TTGCCAAATA CCACGTCACC GAACGTGCGC GCGATGTGGT CACCGACGCG ATGGACATCG TCGGCGGCAA GGGCATCTGC ATGGGCCCGA ACAACTTCCT GGCGCGCGCG TATCAGCAGG TGCCGATCGC CATCACGGTG GAAGGCGCGA ACATCATGAC GCGCTGCCTG ATCATCTTCG GGCAGGGCGT GATCCGCTGC CATCCGTATG TGCTGCGCGA GATGACGGCC GCGCAAGGCA CCGATTCGCC CGAGACGCTG CGTGCGTTCG ATGCGGCGCT GTTCGGCCAC GGCGCGTTCA TCGCCGGCAA CGTGGTGCGT GCGTTCTTGC ATGCGCTCTC CGGCGGGCGC GTAGCGAGCG TGCCGGGCAA CGCCGCGCCG GAAATGCATC GGTATTACCG TGCCGTGAAC CGTTTCTCGA CCGCGCTGGC GCTGCTGTCC GATGTGTCGA TGTTTACGCT GGGCGGCACG CTCAAGCGCC GCGAGAGCAT CACGGGGCGG CTTGGCGACA TCCTCTCGCA GATGTACCTG ATCTCGTCCA CGCTCAAGCG CTTTGAAGAT GAAGGCCGCC CTGCAGAGGA CGCGCCGCTC GTGCATTGGT CGGTGCAGGA CGCGCTGGTG AAGGCGCACG ATGCGCTCGA CGGCGTGCTG GCCAACTTCC CGAACGCGGG CATCGCGGCG CTGCTGCGCG CGCTGATCTT CCCGTTCGGT ACGCCGTATC GAAAGCCGTC GGATGCGCTG GCCGCACAGG TTGCCGAGCT GATGCAGACG CCCGGCGTTG TACGCGATCG CCTGCTTGCC GACTCGTACT GCCCGACGCC CGAAGTCGAC CCGATCGCCT ATGGCGAAGC GGCCTTCCGC CTGCAACCGG CCGTGGACGC AATCGAGCAA CGCTTGAAAC CGGCCATCCG GGCAGGCAAG CTGCCGCCCG TGCCGCAGAG CCTGCCCGAC TTCGAAGCCT GGACGGCGCA AGCCGTCGCA CAGAACCTCA TCGATGAAAG CGAACGCAAG CAACTGTGCG ACTACGCGCG CTACGGTGAG CACGCCGTTG CTGTGGATGA CTTCCCGCCC GACTTCAACC TGATGGCCGA CCTGCAGCGC CGCAAGGATG CGCTCGATGC CCTGCAGACC GCCGAGCGCC GCGCAGCCTG A
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Protein sequence | MTTIWIVLLC IGALALASME ASAVAWLIAT AVWLVAGAWL GLVGPVMTAV LAIVFVLPAL VLAVKPLRRA LITRPVLAMF RKIMPEMSQT ERDAIEAGTV WWDAELFSGR PNWSRLMSSP PPRLSAEEQS FLDIETEKLC DLANDWESTQ IWQDLSPEAW AYAKRAGFLG MIIPKEYGGK GFSAYAHSQV IMKLSTRCSA AAVSVMVPNS LGPAELLLHY GTEAQKDHYL PRLARGEEIP CFALTNAYAG SDAAAIPDVG VVCRGMHEGR ETLGFRVTWS KRYITLGPIA TVLGLAFRAV DPDGLLGADK EPGITCALIP TKHPGVNIGR RHWPLNAVFQ NGPNWGKDVF IPIDWVIGGR AQVGRGWRML MECLAAGRAI SLPSSNVGMA KLAVRSTGAY AAVRRQFRTP IGKFEGIQEA LGRMGGNLYM MDSARRLSAL AVDLGEKPSV ISAIAKYHVT ERARDVVTDA MDIVGGKGIC MGPNNFLARA YQQVPIAITV EGANIMTRCL IIFGQGVIRC HPYVLREMTA AQGTDSPETL RAFDAALFGH GAFIAGNVVR AFLHALSGGR VASVPGNAAP EMHRYYRAVN RFSTALALLS DVSMFTLGGT LKRRESITGR LGDILSQMYL ISSTLKRFED EGRPAEDAPL VHWSVQDALV KAHDALDGVL ANFPNAGIAA LLRALIFPFG TPYRKPSDAL AAQVAELMQT PGVVRDRLLA DSYCPTPEVD PIAYGEAAFR LQPAVDAIEQ RLKPAIRAGK LPPVPQSLPD FEAWTAQAVA QNLIDESERK QLCDYARYGE HAVAVDDFPP DFNLMADLQR RKDALDALQT AERRAA
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