Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0423 |
Symbol | |
ID | 8018048 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 442324 |
End bp | 443694 |
Gene Length | 1371 bp |
Protein Length | 456 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 644829202 |
Product | (dimethylallyl)adenosine tRNA methylthiotransferase |
Protein accession | YP_002980401 |
Protein GI | 241662041 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0621] 2-methylthioadenine synthetase |
TIGRFAM ID | [TIGR00089] RNA modification enzyme, MiaB family [TIGR01574] tRNA-N(6)-(isopentenyl)adenosine-37 thiotransferase enzyme MiaB |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.502734 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAAG TCTTCATCAA AACCTACGGC TGCCAGATGA ACGAGTACGA CTCGGACAAG ATGTCCGACG TACTCAACGC GGCTGAAGGC CTCGTCCCCA CCGACACGCC CGAAGATGCG GACGTGATCC TCTTCAACAC CTGCTCCGTG CGCGAAAAGG CGCAGGAGAA AGTGTTTTCA GAACTCGGCC GCGTGAAGGC GCTCAAGGCG CTCAAGCCGG ATCTCGTGGT CGGCGTGGGC GGCTGCGTGG CCAGCCAGGA AGGCGCGTCC ATCGTGGCGC GTGCCCCTTA CGTTGACGTG GTGTTCGGGC CGCAGACGCT GCACCGCCTG CCCGACCTGA TCGCAGCACG CCGCCGCACG GGCCGCTCGC AGGTCGACGT GTCGTTCCCA GAGATCGAGA AGTTCGACCA CCTGCCGCCC GCGCGCGTGG ATGGCGCCAG CGCCTTCGTA TCGATCATGG AAGGCTGCTC GAAATACTGC AGCTACTGCG TCGTGCCGTA CACGCGCGGC GAAGAGGTCT CGCGCCCGTT CGACGACGTG CTGGCCGAAG TGGCCGGCCT GGCCGAACAG GGCGTGCGCG AAGTCACGTT GCTGGGCCAG AACGTCAACG CCTACATCGG CAAGATGGGC GACACGAGCG AGCGTGCGGA TTTCGCGCTG CTGCTCGAAT ACGTGGCCGA GATTCCGGGC ATCGAGCGCA TCCGCTACAC GACCAGCCAC CCGAAGGAAT TCAGCTCGCG CCTGATCGAG GCCTATGCCA CCAACCCGAA GCTCGTCGAC CACCTGCACC TGCCCGTGCA GCATGGCTCC GACCGCATCC TGATGGCGAT GAAGCGCGGC TACACGGTGC TCGAATACAA AAGCAGCATC CGCAAGCTGC GCGCGATCCG GCCAAATATC TCGATCGCCA CCGACTTCAT CGTCGGCTTC CCGGGCGAGA CGGATGCGGA CTTCGCCAAG ACGATGGACC TGATTCACGA GATCGGCTAC GACACATCGT TCAGCTTTAT CTACAGCCCC CGCCCCGGCA CGCCGGCCGC CAACCTGCCC GACGATACGC CGCAGGCCGT CAAGCTCGAA CGCCTGAAAC ATTTGCAGGC GACCATCGAA GAGAACGTGG CGCGCATCAG CCAAGGCATG GTCGGCAGCG TGCAGCGCAT TCTGGTGGAA GGCCCGTCGC GCAAGGATCC GACTGAACTG CACGGCCGCA CCGAGAACAA CCGTGTCGTG AACTTCGCGC TGCCCGATCT GCCGCAGGCG CGCCGCGACC AGCTGATCGG CCAGATGCTG GACGTGCGTA TCGTGCACGC GTTCCCGCAT TCGTTGCGTG GCGAAGTGGC CGAACAGCGT ACGGCCAGCG CGACTCACTG A
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Protein sequence | MKKVFIKTYG CQMNEYDSDK MSDVLNAAEG LVPTDTPEDA DVILFNTCSV REKAQEKVFS ELGRVKALKA LKPDLVVGVG GCVASQEGAS IVARAPYVDV VFGPQTLHRL PDLIAARRRT GRSQVDVSFP EIEKFDHLPP ARVDGASAFV SIMEGCSKYC SYCVVPYTRG EEVSRPFDDV LAEVAGLAEQ GVREVTLLGQ NVNAYIGKMG DTSERADFAL LLEYVAEIPG IERIRYTTSH PKEFSSRLIE AYATNPKLVD HLHLPVQHGS DRILMAMKRG YTVLEYKSSI RKLRAIRPNI SIATDFIVGF PGETDADFAK TMDLIHEIGY DTSFSFIYSP RPGTPAANLP DDTPQAVKLE RLKHLQATIE ENVARISQGM VGSVQRILVE GPSRKDPTEL HGRTENNRVV NFALPDLPQA RRDQLIGQML DVRIVHAFPH SLRGEVAEQR TASATH
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