| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0421 |
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| Symbol | |
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| ID | 8018046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 440485 |
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| End bp | 441297 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829200 |
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| Product | unkown domain/putative metalloprotease fusion protein |
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| Protein accession | YP_002980399 |
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| Protein GI | 241662039 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0319] Predicted metal-dependent hydrolase |
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| TIGRFAM ID | [TIGR00043] metalloprotein, YbeY/UPF0054 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGCTAAAG CAAAAACCGA TACCAAAGCA AAAACCAAGA AGACCCAGCT CGCGGCCGCG
GAGTCGCTCG GCCCGCGCGT TGACGTATTC GACGCCCAAG GCAAACCGAA GACGGTGGAT
GCGAGCGCGC TGCGCATTGC GTTCGCCGAT GGCCGCAGCC TGATCCTGGG CCTGCCGAAT
ACCGTCGATG GGGCGATCAC CCTCGTTGCC GAGCACGCCG ACGCCGACAT GCACGCCATG
CTTTCGCTGC GTCCGGAGCA CCACGACAGC ATCACGTTGC GCATCGAAAC CCAGCCCGCT
GAATTGGCAG ACTCCACGGA AGAAGCCTTC GACGACGACA CCGCCGGCGC CGAGATGCTC
ACGCTCGACC TGACGGTGCA GTACGGCGAT GAACTGAAGG CTGCCGCCCG CAAGGCACTG
CCGAAAGAGC GCGACATCGA AGCGTGGATT GCCCCCGCAC TGTTTGCCGA TGCGCAGCTC
AACGTGCGCT TTGTCGGCGA AGAAGAAGGC CGCACGCTCA ACCGCACCTA CCGCGGCAAG
GACTACGCCA CCAACGTGCT GACCTTCTCT TACGCCGAGA GCGCGGAAGA CCCGGTGTCG
GCCGACATCG TGCTGTGCTG TGCGGTGGTT GAAAAGGAGG CAAAGGAACA GAAGAAGCCG
CTGACCGCGC ACTACGCACA CCTGATCGTG CACGGCGCGC TCCACGCCCA GGGCTACGAC
CACGAAGACG CGGCGGATGC AAAGGAAATG GAAGGCATTG AAACGGAGAT CCTCCGCGAC
CTCGGTTTTG CCGATCCCTA CGCAGATCGC TAG
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| Protein sequence | MAKAKTDTKA KTKKTQLAAA ESLGPRVDVF DAQGKPKTVD ASALRIAFAD GRSLILGLPN
TVDGAITLVA EHADADMHAM LSLRPEHHDS ITLRIETQPA ELADSTEEAF DDDTAGAEML
TLDLTVQYGD ELKAAARKAL PKERDIEAWI APALFADAQL NVRFVGEEEG RTLNRTYRGK
DYATNVLTFS YAESAEDPVS ADIVLCCAVV EKEAKEQKKP LTAHYAHLIV HGALHAQGYD
HEDAADAKEM EGIETEILRD LGFADPYADR
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