Gene Rpic12D_0417 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0417 
SymbolglyQ 
ID8018042 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp434853 
End bp435839 
Gene Length987 bp 
Protein Length328 aa 
Translation table11 
GC content65% 
IMG OID644829196 
Productglycyl-tRNA synthetase subunit alpha 
Protein accessionYP_002980395 
Protein GI241662035 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0752] Glycyl-tRNA synthetase, alpha subunit 
TIGRFAM ID[TIGR00388] glycyl-tRNA synthetase, tetrameric type, alpha subunit 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.798061 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTCACCT TCCAGCAACT CATCCTCAAG CTGCAGTCGT ACTGGGACGC CCAGGGCTGC 
GCCCTGCTGC AGCCGATCGA TCTCGAAGTC GGCGCCGGCA CGTCGCACGT GCACACCTTC
CTGCGCGCGA TCGGCCCGGA ACCGTGGCGA GCCGCCTATG TGCAACCGTC GCGCCGGCCC
AAGGACGGCC GCTACGGCGA GAATCCGAAC CGCCTGCAGC ATTACTACCA ATATCAGGTG
GTGTTGAAGC CCGCGCCGGA AAACATCCTC GACCTGTACC TCGGTTCGCT GGAAGCGCTG
GGCCTGGACC TGAAGCAGAA CGACGTGCGC TTTGTAGAAG ACGACTGGGA AAACCCCACG
CTCGGCGCCT GGGGCCTCGG CTGGGAGGTC TGGCTCAACG GCATGGAAGT CACGCAGTTC
ACGTACTTCC AGCAAGTTGG CGGCCTGGAC TGCAAGCCCG TGACCGGTGA GATCACCTAC
GGCATCGAGC GTCTGGCGAT GTACCTCCAG CAGGTCGAGA ACATCTACGA CCTGGTCTGG
ACGGAGTGGG AAGAGCCGGG CCCGAACGGC CCCGTGAAGC GCCGCCTGAC CTACGGCGAC
GTCTATCACC AGAACGAAGT CGAGCAATCG ACCTACAACT TCGAGCAGGC CGACACGACC
GTGCTGTTCC GCCGCTTTGC CGAGCACGAA GCCGAAGCCA AGCGCCTGAT GGGCGTGCGC
GCAGAAGGTG ATGCCGCTGC CGAGGGCAAC GCACCGGTCG TGCAACTGGC GCTGCCCGCC
TACGAGCAGG TGCTCAAGGC CGGCCACACC TTCAACTTGC TGGACGCACG CGGCGCCATT
TCCGTGACGG AGCGCGCGGC CTACATCGGC CGCATCCGCA ATTTGTCGCG CCTGGTCGCG
CAGGCTTACT ACGATTCGCG CGAGCGCCTG GGCTTCCCGA TGTGCGGCAC GGCCGCTGCC
GCTGTCAAGA CCACGGAGGC CGCATGA
 
Protein sequence
MLTFQQLILK LQSYWDAQGC ALLQPIDLEV GAGTSHVHTF LRAIGPEPWR AAYVQPSRRP 
KDGRYGENPN RLQHYYQYQV VLKPAPENIL DLYLGSLEAL GLDLKQNDVR FVEDDWENPT
LGAWGLGWEV WLNGMEVTQF TYFQQVGGLD CKPVTGEITY GIERLAMYLQ QVENIYDLVW
TEWEEPGPNG PVKRRLTYGD VYHQNEVEQS TYNFEQADTT VLFRRFAEHE AEAKRLMGVR
AEGDAAAEGN APVVQLALPA YEQVLKAGHT FNLLDARGAI SVTERAAYIG RIRNLSRLVA
QAYYDSRERL GFPMCGTAAA AVKTTEAA