| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0408 |
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| Symbol | pdxA |
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| ID | 8018033 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 426472 |
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| End bp | 427488 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644829187 |
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| Product | 4-hydroxythreonine-4-phosphate dehydrogenase |
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| Protein accession | YP_002980386 |
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| Protein GI | 241662026 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG1995] Pyridoxal phosphate biosynthesis protein |
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| TIGRFAM ID | [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.817677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAACA TTGCCATCAC CACTGGCGAA CCCGCTGGTA TCGGTCCCGA CATCACGGTG
GCCGCGCTGC TGCACCTGGC ACGACAGGCG TCACCGCGTT ACGCCGATGT GCAGTGGCAT
GTGATGGGCG ATTCGGCATT GCTGCAGGCG CGCGCGGACG CGATCGGGCA GGGCGATTTC
TGGCGCATTG TCTCTACGGC GCTGACTGTC GTGGAGCGCC CGCTGGGTGC ACCCGTGCGC
GCCGGCGTGC TTGATGACGC CAACGGCCGC TATGTGCTGG ACCTGCTCGA CGCGGCCATC
GACGGCTGCC TGATCGGCAC GGCAGACGGC ATGCGTTACG ACGCGATGGT CACAGCGCCG
GTGCAGAAGA GCACGATCAA CGACGCCGGG GTGCCGTTTA CCGGCCACAC CGAGTATCTG
GCCGAGCGCA GCCACACGCC GCGCGTGGTC ATGATGCTGG CCGGTCCGCA GCCGGCGCAC
GACAACGCCA TGCTGCGCGT GGCGCTGGCG ACGACGCACT TGCCGCTGCG CGACGTGCCG
GACGCCATCA CGCCAGCGGT GCTCGATGAG ACGCTCGACA TCGTGCAGCG TGATCTGCGC
ACACGCTTCG GTTTGACTGC TCCGCGCATC CTCGTGACGG GGTTGAATCC GCATGCGGGT
GAATCCGGCC ACCTCGGCCG CGAAGAGATC GAGGTGATCG AGCCGGCCAT CGCGCGTGCG
CGTGCGCGCG GAATCGACGC GCGCGGTCCA TATCCGGCCG ATACGCTGTT CCAGCCGCGC
CTGTTGACCG ATGCGGATTG CGTGCTCGCG ATGTACCACG ACCAGGGTTT GGCACCGCTC
AAGTACGGCA CCTTCGGCCA TGGCGTGAAT ATCACGCTTG GCCTGCCGTT CGTGCGCACT
TCGGTGGATC ACGGTACGGC GCTGGATCTG GCGGGCACGG GCCGCGCCGA GTTCGGCAGC
ATGATCGAGG CGATCGATAC CGCCATCGCG ATGGCGCGGC ATACGACGCG CTCCTGA
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| Protein sequence | MLNIAITTGE PAGIGPDITV AALLHLARQA SPRYADVQWH VMGDSALLQA RADAIGQGDF
WRIVSTALTV VERPLGAPVR AGVLDDANGR YVLDLLDAAI DGCLIGTADG MRYDAMVTAP
VQKSTINDAG VPFTGHTEYL AERSHTPRVV MMLAGPQPAH DNAMLRVALA TTHLPLRDVP
DAITPAVLDE TLDIVQRDLR TRFGLTAPRI LVTGLNPHAG ESGHLGREEI EVIEPAIARA
RARGIDARGP YPADTLFQPR LLTDADCVLA MYHDQGLAPL KYGTFGHGVN ITLGLPFVRT
SVDHGTALDL AGTGRAEFGS MIEAIDTAIA MARHTTRS
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