| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0404 |
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| Symbol | |
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| ID | 8018029 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 420469 |
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| End bp | 421197 |
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| Gene Length | 729 bp |
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| Protein Length | 242 aa |
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| Translation table | 11 |
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| GC content | 71% |
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| IMG OID | 644829183 |
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| Product | AzlC family protein |
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| Protein accession | YP_002980382 |
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| Protein GI | 241662022 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1296] Predicted branched-chain amino acid permease (azaleucine resistance) |
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| TIGRFAM ID | [TIGR00346] 4-azaleucine resistance probable transporter AzlC |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.54377 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCCTCCC CCCGCACCGT TGAGTTTCGC GCCGGCATGC TGGCACTCGC GCCGATGCTG
CTGGGCGTGG TGCCGTTCGG CATGATCTAC GGCGTGCTGG CCACGGCGGC CGGCATGCCC
GCGTGGCTTG CCGTGGCGAT GAGCGCCATC GTTTTCGGTG GCGCGTCGCA GATGATCCTC
GTGCAGCTGT GGGCAGGCGG CGCGCCCGCG CTGGTGATTG CGGCGACGGT ATCGATGGTG
AATCTGCGGC ACGCGCTGTA TTCGGCCAGC ATTGCGCCGG CGCTGGCGCA CCTGCCGCGG
CGCTGGAAAT GGCTGATCGC CTATCTGCTG ACCGACGAAG CCTTCGCCGC CATGAACCGC
CGCGTGGTCA CCGCGCAGCC GGGCAGCGAG GAAGCCGCCT ACCGCCATTG GTATTTCCTC
GGCGCGGGCG TGGCGCTGTG GTCGAGCTGG CAGGCGTCGA CCATCGTCGG CGTGCTGCTT
GGCGCGCAGG TGCCGACCTC GTGGCCGCTC GATTTCTTCC TGCCGCTGAC GTTCATCGCC
ATCGTGGTGC CGGCGCTGCG CACGCGCGCC CAACTCGCCG CAGCCTTGGC CGGCGCCGCG
CTGGCCGTGG CGTGGACGGG CTGGCCGCAC AAGCTCGGGC TGATGAGCGC GGCGTGCGTG
GGCATTGCCG TCGGTGCGCT GGTTGAGCGC TTGCTTGCCC GACCGTCCGA CAAGGGGGCT
GCCGCATGA
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| Protein sequence | MASPRTVEFR AGMLALAPML LGVVPFGMIY GVLATAAGMP AWLAVAMSAI VFGGASQMIL
VQLWAGGAPA LVIAATVSMV NLRHALYSAS IAPALAHLPR RWKWLIAYLL TDEAFAAMNR
RVVTAQPGSE EAAYRHWYFL GAGVALWSSW QASTIVGVLL GAQVPTSWPL DFFLPLTFIA
IVVPALRTRA QLAAALAGAA LAVAWTGWPH KLGLMSAACV GIAVGALVER LLARPSDKGA
AA
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