Gene Rpic12D_0371 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0371 
Symbol 
ID8017995 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp388190 
End bp389491 
Gene Length1302 bp 
Protein Length433 aa 
Translation table11 
GC content64% 
IMG OID644829150 
ProductGlu/Leu/Phe/Val dehydrogenase 
Protein accessionYP_002980349 
Protein GI241661989 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0334] Glutamate dehydrogenase/leucine dehydrogenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCAATG TCGCATCTCC GTCGACACTC CAGCACGCCA TCCCGTCCTA TCTGCCGGCC 
GACAATCTTG GCCCGTGGGG CATCTATCTG CAGCAGGTCG ATCGGGTCAC CCCCTATCTC
GGCTCGCTCG CACGTTGGGT TGAAACGCTC AAGCGCCCCA AGCGCGCGCT GATCGTCGAT
GTGCCGATCC AGATGGACGA CGGCCGCATC GCCCACTTCG AGGGCTATCG CGTGCAGCAC
AATACGTCGC GCGGCCCGGG CAAGGGCGGC GTGCGTTTCC ACCAGGACGT CACGCTGTCG
GAAGTGATGG CGTTGTCTGC CTGGATGTCG GTGAAGAATG CGGCCGTGAA TGTGCCGTAC
GGTGGTGCCA AGGGCGGTAT CCGCGTCGAC CCGCGCAAGC TGTCTTCCGG TGAACTTGAA
CGCCTGACGC GCCGCTACAC GAGCGAGATC GGCATCATCA TCGGTCCGAA CAAGGACATT
CCGGCTCCGG ACGTGAACAC CAACGCGCAG ATCATGGCGT GGATGATGGA CACGTACTCA
ATGAACGAAG GCTCCACCGC CACCGGCGTG GTGACCGGCA AGCCGATCGC ACTGGGCGGC
AGCCTGGGCC GTCGCGAGGC CACCGGCCGA GGCGTGTTCG TGGTCGGCAG CGAAGCCGCA
CGCAATCTCG GCATCGACGT CAAGGGTGCG CGCATTGTGG TGCAGGGCTT CGGCAACGTC
GGCAGCGTGG CCGCCAAGCT GTTCCACGAC GCCGGCGCCA AGGTCATTGC GGTGCAAGAC
CACAAGGGCA TCGTGTTCAA CGGCAACGGC CTGGATGTCG ACGCGCTGAT CCAGCACGTT
GACCACAACG GCAGCGTGGC CGGCTTTGCG GCAGAGACCG TCTCGCAAGA CGAATTCTGG
GCGCTGGAGT GCGAATTCCT GATCCCGGCC GCGCTGGAAG GCCAGCTCAC CGCTAAGAAC
GCGCCCCATA TCAAGGCAAA AATTGTCGTG GAAGGTGCAA ACGGCCCGAC GACGCCCGAG
GCGGACGACA TCCTGCGCGA CCGAGGCATC CTGGTCTGCC CGGACGTGAT CGCCAACGCC
GGCGGCGTGA CGGTCAGCTA CTTCGAGTGG GTGCAGGATT TCTCGAGCTT CTTCTGGACC
GAAGACGAGA TCAACCAGCG CCTGGTACGG ATCATGCAAG ATGCCTTCCG TGGCGTCTGG
CAAGTGGCGC AGGACAACAA GGTTACTCTG CGTACGGCGG CGTTCATCAT CGCCTGTACG
CGGATTCTGC AGGCTCGCCA AGAGCGCGGT CTGTACCCCT GA
 
Protein sequence
MSNVASPSTL QHAIPSYLPA DNLGPWGIYL QQVDRVTPYL GSLARWVETL KRPKRALIVD 
VPIQMDDGRI AHFEGYRVQH NTSRGPGKGG VRFHQDVTLS EVMALSAWMS VKNAAVNVPY
GGAKGGIRVD PRKLSSGELE RLTRRYTSEI GIIIGPNKDI PAPDVNTNAQ IMAWMMDTYS
MNEGSTATGV VTGKPIALGG SLGRREATGR GVFVVGSEAA RNLGIDVKGA RIVVQGFGNV
GSVAAKLFHD AGAKVIAVQD HKGIVFNGNG LDVDALIQHV DHNGSVAGFA AETVSQDEFW
ALECEFLIPA ALEGQLTAKN APHIKAKIVV EGANGPTTPE ADDILRDRGI LVCPDVIANA
GGVTVSYFEW VQDFSSFFWT EDEINQRLVR IMQDAFRGVW QVAQDNKVTL RTAAFIIACT
RILQARQERG LYP