Gene Rpic12D_0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0359 
Symbol 
ID8017983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp372334 
End bp373080 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content64% 
IMG OID644829138 
ProductEndonuclease/exonuclease/phosphatase 
Protein accessionYP_002980337 
Protein GI241661977 
COG category[R] General function prediction only 
COG ID[COG3568] Metal-dependent hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCGTT TGCGCGTTGC CACCTACAAC ATCCACAAGG GCGTGACGGG CATCGCGCGG 
CGCGTGCGCG TGCATGACGT TCGGCAGGGC CTGCACACCA TGGACGCCGA CATCGTTTTT
CTGCAAGAGG TGCAGGACCG CAACGACCGC CTGGTCGCCG CCGAGTTGTT CGACCCGAAC
TACACGCAAC TGCGCTACCT TGCGACCGAT GTCTATCCGC ACACGGTCTA TGGCCGCAAC
GCTGTCTACG AGCACGGGCA TCACGGCAAC GCCATCCTGT CGCGATTTCC GATCCTGCTG
TCGGAAAACC TGGATATCTC CGATCACCGT TTCGAGCAGC GCGGCCTGCT GCATGCCGTC
ACCGATCTCG GCTTTGGCGA GGTGCATTTG CTGTGCGCGC ACTTCGGCTT GTTTGCCCGC
AGCCGGCAGC GGCAGGCGGA GGCACTGGTC GATCGCGTGC GTTCGGTCGT GCCACCCGAT
GCGCCGCTCG TGGTGGCGGG CGATTTCAAC GATTGGAACA ACCGGCTCGA TCGCATGATT
TGCCAGGCGC TGGGTGCGAC CGAAGTGGCC GACAAGGCCG CCGATGCGCG CCCGGTCCGC
ACCTTCCCCA GCCAGATGCC GTGGTTGCGG CTGGACCGCA TCTATGTGCG CGGTTTCGAT
ATTGAACGTG CGCACGCGCT GACGGGCCGC GAGTGGGCAC AACGCTCCGA TCACGTGCCC
CTGCTGGCTG AACTGGCGCA TCCATGA
 
Protein sequence
MLRLRVATYN IHKGVTGIAR RVRVHDVRQG LHTMDADIVF LQEVQDRNDR LVAAELFDPN 
YTQLRYLATD VYPHTVYGRN AVYEHGHHGN AILSRFPILL SENLDISDHR FEQRGLLHAV
TDLGFGEVHL LCAHFGLFAR SRQRQAEALV DRVRSVVPPD APLVVAGDFN DWNNRLDRMI
CQALGATEVA DKAADARPVR TFPSQMPWLR LDRIYVRGFD IERAHALTGR EWAQRSDHVP
LLAELAHP