Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0356 |
Symbol | aspS |
ID | 8017980 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 368860 |
End bp | 370731 |
Gene Length | 1872 bp |
Protein Length | 623 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644829135 |
Product | aspartyl-tRNA synthetase |
Protein accession | YP_002980334 |
Protein GI | 241661974 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0173] Aspartyl-tRNA synthetase |
TIGRFAM ID | [TIGR00459] aspartyl-tRNA synthetase, bacterial type |
| ![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_cp.jpg)
![](https://exploration.weizmann.ac.il/pandatox/images_new/ic_hh.jpg)
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCGACG CTTTCTTGGC GGCGCGCTTC GCGGAAAACC ACAACATGCA AATGCGTACT CAATACTGCG GTCAGGTCAC CGAACAACTG CTCGGCCAGA GCGTCACGCT GTCGGGCTGG GCCCATCGCC GTCGTGACCA CGGTGGCGTG ATCTTCATCG ACCTGCGCGA CCGTGAAGGT CTGGTACAGG TCGTGTGTGA CCCGGACCGC CCGGAGATGT TCAAGGTGGC CGAAGGTGTG CGTAACGAGT TCTGCCTGCA GGTGAAGGGC GTCGTGCGCG CCCGCCCGGA AGGCACGACC AACGCCAACC TCACCAGCGG CAAGGTTGAA GTGCTGTGCC ACGAGCTGAC GGTGCTCAAC GCTTCGGTCA CGCCGCCGTT CCAGCTGGAC GATGACAACC TGTCGGAAAC CACGCGCCTG ACGCATCGCG TGCTGGACCT GCGCCGCCCG CAGATGCAGT ACAACCTGCG CCTGCGCTAC AAGGTCGCGA TGGAGGTGCG CAAGTACCTG GACGACAAGG GCTTCATCGA CATCGAAACG CCGATGCTGA CCAAGAGCAC ACCGGAAGGC GCGCGCGATT ATCTGGTTCC GTCCCGCGTG AACGCCGGCC AGTTCTTCGC GCTGCCGCAG TCGCCGCAGC TCTTCAAGCA GATGCTGATG GTGTCGGGCT TCGACCGTTA CTACCAGATC ACCAAGTGCT TCCGCGACGA AGACCTGCGC GCCGACCGCC AGCCCGAATT CACCCAGATC GACTGCGAAA CGTCGTTCCT GAGCGAGCAG GAAATCCGCG ACCTGTTTGA AGAAATGATC CGCACGGTGT TCAAGAACAC CATGTCGGTC GAGCTGGATG CCAAGTTCCC GGTGATGGAG TTCCGCGAGG CGATGGCCCG CTTCGGTTCG GACAAGCCGG ACCTGCGCGT CAAGCTGGAG TTCACCGAGC TGACTGATGC CATGAAGGAC GTCGACTTCA AGGTGTTCTC GGGCCCGGCC AACGCCGAAG GCGGCCGTGT CGTGGCACTG CGCGTGCCGG GCGGGGCGTC CCTGTCGCGT GGGGATATCG ACGCCTACAC CAAGTTCGTC GAAATTTATG GTGCCAAGGG CCTGGCCTGG ATCAAGGTCA ACGAAGTGGC CAAGGGCCGC GACGGCCTGC AATCGCCGAT CGTGAAGAAC CTGCACGACG CGGCCATCGC CGAGATCTTG AAGCGCAGCG GCGCGCAGGA TGGCGACATC CTGTTCTTCG GTGCCGACCG TGCCAAGGTC GTCAACGATG CGATGGGCGC GCTTCGTCTG AAGGTCGGCC ACTCGGACTT TGCCAAGAGC ACCGGCCTGT TCGAAGACGC CTGGAAGCCG CTGTGGGTGA TCGACTTCCC GATGTTCGAG TACGACGAGG AAGACGCGCG CTGGGTGGCC ATGCACCACC CGTTCACGAG CCCGAAGGAC GAGCACCTGG AATACCTGGA AACCGATCCG GGCAAGTGCA TCGCCAAGGC TTACGACATG GTGCTCAACG GCTGGGAAAT CGGCGGCGGC TCGGTGCGGA TCTACCGCGA AGAAGTGCAG AGCAAGGTGT TCCGCGCGTT GAAAATCAAC GATGAGGAAG CGCGTGCCAA GTTCGGCTTC CTGCTCGATG CACTGCAATA CGGCGCGCCC CCGCACGGCG GTATTGCGTT CGGTCTGGAC CGCGTCGTCA CGATGATGGC CGGTGCTGAT TCGATCCGCG ACGTGATCGC TTTCCCGAAG ACGCAGCGTG CGCAGGATCT GCTGACGCAG GCACCGAGCC CGGTCGACGA AAAGCAGTTG CGCGAACTGC ATATCCGTCT GCGCGCTGCC GAGGCAAAGG TCGCTGCACC CACGGCTGCA ACGACCGCCT AA
|
Protein sequence | MRDAFLAARF AENHNMQMRT QYCGQVTEQL LGQSVTLSGW AHRRRDHGGV IFIDLRDREG LVQVVCDPDR PEMFKVAEGV RNEFCLQVKG VVRARPEGTT NANLTSGKVE VLCHELTVLN ASVTPPFQLD DDNLSETTRL THRVLDLRRP QMQYNLRLRY KVAMEVRKYL DDKGFIDIET PMLTKSTPEG ARDYLVPSRV NAGQFFALPQ SPQLFKQMLM VSGFDRYYQI TKCFRDEDLR ADRQPEFTQI DCETSFLSEQ EIRDLFEEMI RTVFKNTMSV ELDAKFPVME FREAMARFGS DKPDLRVKLE FTELTDAMKD VDFKVFSGPA NAEGGRVVAL RVPGGASLSR GDIDAYTKFV EIYGAKGLAW IKVNEVAKGR DGLQSPIVKN LHDAAIAEIL KRSGAQDGDI LFFGADRAKV VNDAMGALRL KVGHSDFAKS TGLFEDAWKP LWVIDFPMFE YDEEDARWVA MHHPFTSPKD EHLEYLETDP GKCIAKAYDM VLNGWEIGGG SVRIYREEVQ SKVFRALKIN DEEARAKFGF LLDALQYGAP PHGGIAFGLD RVVTMMAGAD SIRDVIAFPK TQRAQDLLTQ APSPVDEKQL RELHIRLRAA EAKVAAPTAA TTA
|
| |