| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0346 |
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| Symbol | |
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| ID | 8017970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 358489 |
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| End bp | 360333 |
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| Gene Length | 1845 bp |
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| Protein Length | 614 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829125 |
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| Product | ABC transporter domain protein |
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| Protein accession | YP_002980324 |
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| Protein GI | 241661964 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4178] ABC-type uncharacterized transport system, permease and ATPase components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.274021 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGACAC CGCGCACCGC CGCTACGCCC GATTCCCACA AGGATTCCAT CTCCGAGTTG
ACCGTTCACC ATGGACGGCT GAACCTCTCG GAGACTTGGC AACTGATCCG CCCGTACTGG
TTTTCGGAAG ACCGCCACAA GGCCTGGGGG CTGCTTGCAT TGGTGGTCGC CCTGAACCTG
TTTCTGGTCT ACATGAACGT GCTGTTCACG GACTGGAACC GGCTTTTCTA CAATGCGCTC
GAGCAGAAGA ACTACGGCGA ATTCTGGACG CAGCTGGGCC GCTTTTCATG GATTGCCGCG
TTGCTGATCT TTGGCTCGAT CATGCGTTTG TATTACTCGA TGATGCTGCA GATGCGGTGG
CGGACGTGGA TCACCGGTAG CTTCCTCGAC GACTGGCTCA GCAAGCAGGC GTTCTACCGC
CTCGAACAGA CGCACAGCGC CGACAACCCC GACCAACGGA TCGCCGACGA CCTGCGCAAC
TTCACCGATG CGACGCTCAC CTTGGCGCTG GGTTTCCTGA ATTCCGCTGT CACGCTGGTG
TCGTTCTTCG GCATCCTGTG GGCGGTGTCG GGGCCGCTGG CGTTCAGCCT GGGCGGCCAC
GACTTCGTGA TTCCCGGCTA CATGGTGTGG TTTGCGCTGC TGTACTCGAT CGTGGGCTCG
GTCATCATCC ACTTTGTGGG GCGGCCGCTG ATCGGGCTGT CGTTCCAGCA GGAGCGTTAC
GAGGCGTACT TCCGTTTCCT GCTCGTGCGC GTGCGTGAGA ACAGCGAAAG CATCGCCCTG
TACCGCGGCG AGCCGACCGA AAAAGCCATC CTGCGCGGCC GTTTCGAACG CATCCGCACC
AACTGGAACC AGTTGATGGA CTACACACGG CGCCTGACCT TTGCCAGTTC CGGCTATGCG
CAGTTCGCCA TCATCTTCCC GTTTCTGGTG TCGGCGCCGC GCTACTTTGG CGGCACGCTC
ACGCTGGGCG GAATGATGCA GGTCGCCACG GCGTTCGGGC AGGTACAGGA TGCGATGTCG
TGGTTTGTCA CGAACTACCG CACGCTCGTC ACCTGGAAAG CTTCCACCAA CCGTCTGATC
GAATTCCAGC GCGCCATCCG CGCCGCCGAG CGCGAAGAAG AGCACCGCGC CGGCGTGCGG
GATGTCGAGG TCGAAACCGC CGCCGTACCC GCCATCGAAG CCCGCGGCCT CGCGTTGAAT
CTGCCGAACC GCAAGCCCGA AGACTTGCTG GTCAAACCCT TCGACATGAC GCTCGCACGG
GGTGAGCGCG TGCTCGTCAA CGGCCCGTCG GGCTGCGGCA AAAGCACGCT GGTGCGTGCC
GTGGCCGGCA TCTGGCCGTA CGGCAGCGGT CGCATCGAGG TGCCGGACGA TGCTCGCGTG
CTGTTCCTGC CACAGCGCAG CTACCTGCCG TCGGGCACGC TGGCCGATGC GCTGTCGTAT
CCGGATTTGG CCACCCAGTA CACCGCTGAG CGTCTGACCC AGGTGCTGAA CGCATGCCGG
TTGCCGGCAC TGGTTGATCT ACTGGACGAG GTCAGCAACT GGAGCCTGCG CCTGTCGCCG
GGCGAGCAGC AGCGCCTCGC TTTTGCTCGT GCGTTGCTGC AGCGCCCCGA TTACCTCTTC
CTCGACGAGG CCACCAGCGC ACTCGACGAA GACACCGAGG CGTTCATGTA CAGCCTGATG
CTCGAATCGA TGCCTGATGT GACCATCGTC AGCGTGGCGC ACCGCAGTAC CGTCGCACGA
TTCCACCACC GCCGCCTGCG CTACATCCCC GAGGGCGATC CGTTGACTGC GGTAAGCTAT
CGGGTGGTGG AAGAGCCTGC GCACATGGCG CTGGCAGCTT CCTGA
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| Protein sequence | MTTPRTAATP DSHKDSISEL TVHHGRLNLS ETWQLIRPYW FSEDRHKAWG LLALVVALNL
FLVYMNVLFT DWNRLFYNAL EQKNYGEFWT QLGRFSWIAA LLIFGSIMRL YYSMMLQMRW
RTWITGSFLD DWLSKQAFYR LEQTHSADNP DQRIADDLRN FTDATLTLAL GFLNSAVTLV
SFFGILWAVS GPLAFSLGGH DFVIPGYMVW FALLYSIVGS VIIHFVGRPL IGLSFQQERY
EAYFRFLLVR VRENSESIAL YRGEPTEKAI LRGRFERIRT NWNQLMDYTR RLTFASSGYA
QFAIIFPFLV SAPRYFGGTL TLGGMMQVAT AFGQVQDAMS WFVTNYRTLV TWKASTNRLI
EFQRAIRAAE REEEHRAGVR DVEVETAAVP AIEARGLALN LPNRKPEDLL VKPFDMTLAR
GERVLVNGPS GCGKSTLVRA VAGIWPYGSG RIEVPDDARV LFLPQRSYLP SGTLADALSY
PDLATQYTAE RLTQVLNACR LPALVDLLDE VSNWSLRLSP GEQQRLAFAR ALLQRPDYLF
LDEATSALDE DTEAFMYSLM LESMPDVTIV SVAHRSTVAR FHHRRLRYIP EGDPLTAVSY
RVVEEPAHMA LAAS
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