| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0344 |
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| Symbol | |
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| ID | 8017968 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 353888 |
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| End bp | 357925 |
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| Gene Length | 4038 bp |
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| Protein Length | 1345 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829123 |
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| Product | FAD linked oxidase domain protein |
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| Protein accession | YP_002980322 |
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| Protein GI | 241661962 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0247] Fe-S oxidoreductase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.599686 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.30676 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCCC CACTTCTGAT CGACGCCAAA CTCACGGCGC AGGACGCTGC GCCCCGGCTG
CGCGAGATTC CCTACAACTA CACCTCGTTC TCGGATCGGG AAATCGTCAT CCGTCTGCTG
GGCGAGTCTG CGTGGCAGAT CCTGGACGAA CTGCGTGCGG AGCGCCGCAC CGGCCGATCG
GCACGCATGC TGTACGAAGT GCTGGGCGAC ATCTGGGTGG TGCGCCGCAA CCCGTATCTG
CAGGACGACC TGCTCGACAA CCCGAAGCGC CGGCAGATGC TGATCGACGC ACTCAATCAC
CGCCTGGCGG AGATCGAGAA GCGCCGCGTG GCCGACCACG ATTCGCATCA CGACCCCGTG
GGCGACGAGC GCGCCAGCAA GGTGCAGCAA CTCGTCGTGC ATGCCCGCCG CGCCGTCAAG
GCATTCCAGG AAGAATTCGC CCAGGTGTAC GACCTGCGCC GCCGCGCCCA GAAAGTGCTC
GGCCGCGTCA CCGCGAAGGA CAACATCAAG TTCGATGGCC TGTCGCGCGT GTCGCACGTG
ACGGACGCCA CCGACTGGCG TGTCGAATAT CCGTTCGTCG TGCTCACGCC CGATACGGAA
GAAGAGATTG CCGGCATCGT GAAGGGCTGC TTCGAGCTGG GCCTGACCAT CATCCCGCGC
GGAGGCGGCA CCGGCTACAC CGGCGGCGCC GTGCCGCTCA CGCCGTTCTC GGCGGTCATC
AATACGGAAA AGCTGGAACG CCTGGATGCG GTCGAGATGA CCGACCTGCC GGGCGTTGAC
CACCCTGTGG CGACCATCTA TTCGGGCGCC GGCGTGGTGA CGCGACGCGT GGCCGATGCG
GCGGAAAAGG CCGGCCTTGT CTTCGCCGTG GACCCGACCT CGATCGACGC GTCGTGCATC
GGCGGCAACG TCGCCATGAA CGCGGGCGGC AAAAAGGCGG TCCTGTGGGG CACCGCGCTG
GACAACCTCG CCTGGTGGCG CATGGTTGAC CCGGACGGCA ACTGGCTCGA AGTCACGCGC
CTCAATCACA ACCTGGGCAA GATCCACGAT GCGCCGGTCG TCACCTTCGA GCTGAAGTGG
TTCGACGGCA ACGCGCCGGT CGGCGCCAAG CTGCTGCGCA CCGAGACCCT GACCATCGAA
GGCCGCAAGT TCCGCAAGGA AGGCCTCGGC AAGGACGTCA CCGACAAGTT CCTGGCCGGC
CTGCCCGGCG TGCAGAAGGA AGGCTGCGAC GGCATCATCA CCAGCGCCCG CTGGATTCTG
CACCGCATGC CCAAGTCGAT CCGCACCGTG TGCCTGGAGT TCTTCGGCCA GGCACGCGAC
GCGATCCCCA GCATCGTCGA GATCAAGGAT TACCTCGACG CCGAGACCAA GAAACCCGGC
GGCGCGATCC TCGCTGGCCT GGAACACCTT GATGAGCGCT ACCTGCGCGC GGTCGGGTAC
GCTACCAAGA GCAAGCGCAA CGCGTTTCCG AAGATGGTGC TGATCGGTGA CATCGTCGGG
GATGACGACG ACGCCGTGGC GCGCGCCACC TCGGAAGTGA TCCGCCTCGC CAACGGCAAG
AGCGGCGAGG GCTTCGTGGC CGTGAGCCCT GAAGCACGCA AGAAATTCTG GCTGGACCGC
TCGCGCACAG CCGCGATCGC CAAGCACACC AACGCCTTCA AGATCAACGA AGACGTGGTC
ATCCCGCTCA ATCGCATGGG CGAGTACACC GACGGCATCG AGCGCATCAA CATCGAACTG
TCGATCAAGA GCAAGCTCAA GCTGACCGAT GCGCTGCTCG ATTTCTTTGC CGGCAGCAAC
CTGCCGCTGG GCCGCACCGA CGACGCCAAC GAAATCCCCA GCGCTGAACT GCTGGAAGAC
CGCGTGCAGC AGGCGCAGCA ACTGCTGCGT GCCACGCGCG CACGTTGGCA ATATCTGCTG
GACCATCTCG ACACGCCGGT CACCACGGCG CGTGCCAGCC TCATCGGGCT CGGCCTGGGC
TACCTTGCAC AGACCATCGA CGACCGTCTG GTGAACCAGC CCGACGCCAA CCTGTTCCAC
CTGCTGCAGG ATCGTACGAT CCGCGTGTCG TGGAAGGCAG AGATTCGCGC CGAGCTGCGC
AAGATCTTCA ACGGCGGCGA GTTCAAGCCG ATCCTCGACG AGGCGCAGGC GATCCACAAG
AAAGTGCTGC GCGGCCGCGT GTTCGTCGCG CTGCACATGC ACGCCGGCGA CGGCAACGTG
CACACCAACA TCCCCGTCAA CTCGGATGAT TACGACATGC TGCAGGACGC CCACAAGGCG
GTGGCCCGCA TCATGACGCT GGCGCGTTCG CTGGACGGCG TGATTTCAGG CGAGCACGGC
ATCGGCATCA CCAAGCTGGA ATTCCTCACC GACGAAGAGA TCGCCGACTT TGCTGCCTAC
AAGCGCCGCG TCGACCCGAA CGGCCGCTTC AACAAGGGCA AGCTGCTGCG CGACATCAAT
GACCCGCAAG GCCTGGCCGC CGACCTTCGC AACGCCTACA CGCCGTCGTT CGGCCTGATG
GGGCACGAGT CGATCATCAT GCAGCAGAGC GACATCGGCG CAATCTCGGA GTCGATCAAG
GACTGCCTGC GCTGCGGCAA GTGCAAGCCG GTGTGTGCCA CGCACGTGCC GCGCGCCAAC
CTGCTGTACA GCCCGCGCAA CAAGATCCTC GCCACGTCGC TGCTCATCGA GGCCTTCCTG
TACGAAGAAC AGACGCGCCG CGGCGTGTCG GTCAAGCACT GGGAAGAGTT TGCCGACGTG
GGCGATCACT GCACGGTCTG CCACAAGTGC GTGACGCCGT GCCCGGTCAA GATCGACTTC
GGCGATGTGT CGATGAACAT GCGCAACCTG CTGCGCAAGA TGGGGCAGAA GAAGTTCAAC
CCCGGCACCG CAGCGGCGAT GTTCTACCTG AACGCGACCA ACCCCGAGAC CATCAACCTC
ACGCGCAAGG TGATGTTCGA CTGGGGCTAC AAGGCGCAGC GTCTGGGCAA TGACATCCTG
AAGAAATTCG CCAAGAAGCA GACCGCACGT CCGCCCGCTA CGGTGGGCAA GCCGCCGGTG
CGCGAGCAGG TGATCCACTT CATCAACAAG AAGATGCCGG GCAACCTGCC CAAGAAGACC
GCGCGCGCGT TGCTGGACAT CGAAGACAAC GAGATCGTCC CGATCATCCG CAACCCGAAG
GCGACCACGC CCGACAGCGA AGCGGTGTTC TACTTCCCGG GCTGCGGCTC GGAGCGGCTG
TTCTCGCAGG TGGGCCTGGC CACGCAGGCA ATGCTGTGGC ACGCCGGCGT GCAAACGGTG
CTGCCGCCGG GCTACCTGTG CTGCGGCTAC CCGCAGCGCG GCACGGGCCA GTTCGACAAG
GCCGAGAAGA TCGTCACCGA CAACCGCGTG CTGTTCCATC GCGTGGCCAA CACGCTCAAC
TACCTCGACA TCAAGACGGT GGTGGTGAGC TGCGGCACCT GCTACGACCA ACTGGCCGGG
TACGAATTCG ACAAGATCTT CCCGGGCTGC CGCATCATCG ACATTCACGA ATACCTGCTG
GAGAAGGGCG TGAAGATCGA CGGTGTGCAG GGTACGCGGT ACATGTACCA CGACCCTTGC
CACACCCCGA TCAAGACGAT GGACCCGACC AAGCTGGTCA ACCAGCTGAT GGGCGGCAAC
ATCGGCGCGG ATGGCCAGAC CAGCGCGATC GAGAAGAACG ACCGCTGCTG CGGCGAGTCC
GGGACGCTGG CGATTTCACG CCCGGACATT TCGACGCAGG TCCGCTTCCG CAAGGAAGAG
GAGATGCAGA AGGGTGCCGA CAAGCTGCGC AGCCTTGGCC AGACCAGCGG CCAGGGCGGC
GAGGCGTTCA ACGGCGACGT GAAGATTCTC ACGAGCTGCC CGGCATGTCT GCAGGGCCTG
TCGCGCTACA CCGAAGACGT CTCGGTACAG GCCGACTACA TCGTGGTCGA GATGGCGCGT
CACGTGCTCG GCGAAACCTG GCTGCAGGAC TACGTTGCGC AGGCCAACGC CGGCGGCATC
GAGCGGGTTC TGGTGTGA
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| Protein sequence | MNAPLLIDAK LTAQDAAPRL REIPYNYTSF SDREIVIRLL GESAWQILDE LRAERRTGRS
ARMLYEVLGD IWVVRRNPYL QDDLLDNPKR RQMLIDALNH RLAEIEKRRV ADHDSHHDPV
GDERASKVQQ LVVHARRAVK AFQEEFAQVY DLRRRAQKVL GRVTAKDNIK FDGLSRVSHV
TDATDWRVEY PFVVLTPDTE EEIAGIVKGC FELGLTIIPR GGGTGYTGGA VPLTPFSAVI
NTEKLERLDA VEMTDLPGVD HPVATIYSGA GVVTRRVADA AEKAGLVFAV DPTSIDASCI
GGNVAMNAGG KKAVLWGTAL DNLAWWRMVD PDGNWLEVTR LNHNLGKIHD APVVTFELKW
FDGNAPVGAK LLRTETLTIE GRKFRKEGLG KDVTDKFLAG LPGVQKEGCD GIITSARWIL
HRMPKSIRTV CLEFFGQARD AIPSIVEIKD YLDAETKKPG GAILAGLEHL DERYLRAVGY
ATKSKRNAFP KMVLIGDIVG DDDDAVARAT SEVIRLANGK SGEGFVAVSP EARKKFWLDR
SRTAAIAKHT NAFKINEDVV IPLNRMGEYT DGIERINIEL SIKSKLKLTD ALLDFFAGSN
LPLGRTDDAN EIPSAELLED RVQQAQQLLR ATRARWQYLL DHLDTPVTTA RASLIGLGLG
YLAQTIDDRL VNQPDANLFH LLQDRTIRVS WKAEIRAELR KIFNGGEFKP ILDEAQAIHK
KVLRGRVFVA LHMHAGDGNV HTNIPVNSDD YDMLQDAHKA VARIMTLARS LDGVISGEHG
IGITKLEFLT DEEIADFAAY KRRVDPNGRF NKGKLLRDIN DPQGLAADLR NAYTPSFGLM
GHESIIMQQS DIGAISESIK DCLRCGKCKP VCATHVPRAN LLYSPRNKIL ATSLLIEAFL
YEEQTRRGVS VKHWEEFADV GDHCTVCHKC VTPCPVKIDF GDVSMNMRNL LRKMGQKKFN
PGTAAAMFYL NATNPETINL TRKVMFDWGY KAQRLGNDIL KKFAKKQTAR PPATVGKPPV
REQVIHFINK KMPGNLPKKT ARALLDIEDN EIVPIIRNPK ATTPDSEAVF YFPGCGSERL
FSQVGLATQA MLWHAGVQTV LPPGYLCCGY PQRGTGQFDK AEKIVTDNRV LFHRVANTLN
YLDIKTVVVS CGTCYDQLAG YEFDKIFPGC RIIDIHEYLL EKGVKIDGVQ GTRYMYHDPC
HTPIKTMDPT KLVNQLMGGN IGADGQTSAI EKNDRCCGES GTLAISRPDI STQVRFRKEE
EMQKGADKLR SLGQTSGQGG EAFNGDVKIL TSCPACLQGL SRYTEDVSVQ ADYIVVEMAR
HVLGETWLQD YVAQANAGGI ERVLV
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