| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0340 |
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| Symbol | |
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| ID | 8017964 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 349187 |
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| End bp | 350707 |
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| Gene Length | 1521 bp |
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| Protein Length | 506 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644829119 |
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| Product | threonine dehydratase |
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| Protein accession | YP_002980318 |
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| Protein GI | 241661958 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG1171] Threonine dehydratase |
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| TIGRFAM ID | [TIGR01124] threonine ammonia-lyase, biosynthetic, long form |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.432772 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCATCG ATTACCTCAA GAAAATCCTG ACTGCGAAGG TCTATGACGT CGCGGTCGAA
ACCGAGCTGA AGTTCGCGCC CAACCTGTCG GCGCGCACCG GCAACCGCGT GTACCTCAAG
CGCGAGGATG ACCAGCCGGT GTTCTCGTTC AAGCTGCGCG GCGCCTACAA CAAGATGGCC
TCGCTCACGC CGGCCGAGCG CAAGCGCGGG GTAATCACGG CATCGGCGGG CAACCACGCG
CAGGGCGTGG CGTTCAGCGC GGCGCGCATG GAATGCAAGG CCGTGATCTG CATGCCGGTG
ACGACGCCGC AGCTGAAGAT TGACGGCGTG CGCTCGCGCG GCGGCGATTG GGTCGAGGTC
GTGCTGCACG GCGAAAGCTA TTCCGACGCG TACAACCACG CCGCCCAGCT GCAGGAAAAA
CACGGCTACA CCTTCGTGCA CCCGTTCGAC GACCCGGAAG TGATTGCCGG CCAGGGCACG
ATCGCCATGG AAATCCTGCG CCAGCATCCA CAGCCGATCC ATGCAATCTT TTGCTCGATC
GGCGGGGGCG GCCTGATCTC GGGCATTGCG GCCTACGTGA AGGCCGTACG GCCGGACGTC
AAGGTCATCG GTGTGCAAAG CGTGGATTCC GACGCGATGG CGCGCTCGGT GGCCGCCGGC
AAGCGCGTCG AACTGAAAGA GGTGGGCCTG TTTGCTGACG GCACGGCAGT CAAGCTGGTT
GGCAAGGAGA CCTTCCGCAT CACGCGCGAA CTCGTCGACG AGATCATCAC CGTGGATACG
GATGCCATCT GCGCGGCGCT CAAGGACGTG TTCCAGGACA CGCGCAGCTT GCTGGAGCCG
TCGGGCGCGC TGGCGCTGGC CGGCCTCAAG CAGTATGCCG AGACGCACAA GCTGAAGAAC
GAATCGCTGG TGGCCGTGGC CAGTGGTGCG AACATGAACT TCGACCGCCT GCGCTTCGTG
GCCGAGCGCG CTGAAGTGGG CGAGGCGCGC GAAGCCGTGT TTGCCGTGAC GATTCCCGAA
GAGCGCGGCA GCTTCAAGCG CTTCTGCGAA CTGGTCGGCT GGTCGCGCAA CGTGACGGAG
TTCAACTACC GCATTGCGAG CAAGGACGCT GCGCATATCT TCGTGGGCGT GCAAATTGCA
TCGCGCGCAG AGGGCGACAA GATTGCCGAG AACTTCCGCA AGCACGGTTT CCCCACGCTG
GACCTGTCGA ACGACGAACT GGCCAAGCAG CACATCCGCT ACATGGTGGG CGGCCGCTCG
CCCCTGGCGG AAAACGAGCA TCTCTATCGC TTCGAGTTTC CCGAGCGGCC CGGCGCGCTG
ATGAAGTTTC TCTCGAGCAT GAGCCCGAAC TGGAACATCA GCCTGTTCCA CTACCGTAAT
CAGGGCGCGG ATTCGAGCAA CATCCTCGTC GGCATCCAGG TGCCGAAGAA CGAGAAACGC
GAGTTCAAGG CGTTCCTCGC CACGCTGGGC TATACCTATT GGGACGAAAG CGAGAACCCC
GTCTACAGTC TGTTTTTGTG A
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| Protein sequence | MAIDYLKKIL TAKVYDVAVE TELKFAPNLS ARTGNRVYLK REDDQPVFSF KLRGAYNKMA
SLTPAERKRG VITASAGNHA QGVAFSAARM ECKAVICMPV TTPQLKIDGV RSRGGDWVEV
VLHGESYSDA YNHAAQLQEK HGYTFVHPFD DPEVIAGQGT IAMEILRQHP QPIHAIFCSI
GGGGLISGIA AYVKAVRPDV KVIGVQSVDS DAMARSVAAG KRVELKEVGL FADGTAVKLV
GKETFRITRE LVDEIITVDT DAICAALKDV FQDTRSLLEP SGALALAGLK QYAETHKLKN
ESLVAVASGA NMNFDRLRFV AERAEVGEAR EAVFAVTIPE ERGSFKRFCE LVGWSRNVTE
FNYRIASKDA AHIFVGVQIA SRAEGDKIAE NFRKHGFPTL DLSNDELAKQ HIRYMVGGRS
PLAENEHLYR FEFPERPGAL MKFLSSMSPN WNISLFHYRN QGADSSNILV GIQVPKNEKR
EFKAFLATLG YTYWDESENP VYSLFL
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