Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0320 |
Symbol | |
ID | 8017944 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 330188 |
End bp | 331885 |
Gene Length | 1698 bp |
Protein Length | 565 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 644829099 |
Product | Beta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ |
Protein accession | YP_002980298 |
Protein GI | 241661938 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGACTT ACCCGCTGGT CTCCCATTCA ACGCTCGACC ACACGCTTGC CTGGCGTGAC GGCACGCCCG TCTCCGCACG CGCGTTCCTG GCAGATGTGA TGGCGCTGGC CCCGATGCTG CCGCCGGGCG GCCACGTATT CAATGCCTGC GCAGACCGTT ACCGCTTTGC CGTCGGGCTG TGCGCAACGC TGGTGGCCGG AAAGATCAGC TTGCTGCCGC CCATGCAGAC GCCGCAGATG GTGCGTCAGC TTTCGGCATT CGCGCCGGAT GTGTTCTGCC TGCACGACGC GGCGGCCTGC CCCGTCGACC TGCCGGGCTT TTGTTATCCC GATGCGTTGG ATGCCGACAC CGCGCCCATC GACGTGCCGC AGATCGACGC CTCGCAAATC ATGGCGGTGC TGTTTACGTC CGGATCGACG GGCACGCCGG TGCCGCATCG CAAGACGTGG GGCGCGCTGG TGCGCTGCAT GCGCACGGCC GTCGACCATC TCGGCCTGGG CGACGGGCGC GCGTTCACGC TGGTCGGCAC CGTGCCGGCG CAGCACATGT ACGGCTTTGA GGTGACGGTG CTGCTGGCGC TGCAAGGTGG CCTGGCGTTC AGCAACCGGC AGCCGTTCTA TCCGGCGGAC ATTCGCGAGG CGCTGGACGC CGTACCGCAG CCGCGCGTGC TGGTGACCTC GCCGGTGCAT CTGCGAGCGC TGCTGGCATC GGAGGCCGCC TTGCCGAGCG CATCGCTCGT GCTGTCGGCC ACTGCGCCGC TCTCGGAGGC GCTGGCGCGC GAGGCCGAGA CGCGCTTATC CGCGCCGCTC CTGGAGATTT ACGGCAGCAC CGAAACCGGC CAGGTGGCGA CGCGCCGCAC CGCGCAGGAA ACGGCGTGGC ACCTGTACCC CGGCGTTCGC ATGGAATCGC GCGCCGGCAC GCCGGCAGAC GAAGGCCCGA CGGTGTGGGT CTATGGCGAA CACGTCGAAA CCCCGGTACC GATGGGTGAC GCGATCGAAC TGATCGACGA CACGCACTTT CTCCTGCACG GGCGCAAGGC CGATCTGATC AACATTGCAG GCAAGCGGTC GTCGCTGGCG TATCTGAACC ATCAACTCAA CGCGATTGCC GGTGTGGTGG ACGGCGTGTT CTACATGCCG AACGATGCGC CCGCCGCCCC GCACAAGCAC GGCAGCGCGG CAGTCACGCG CCTGGTGGCG CTGGTTGTGG CGCCGGGCCT CAGCGCGGCG GATGTGCTGC GTGCCCTGCA CGACCGCATC GACGCAGCGT TTATGCCGCG TCCGCTGCTG CTGGTGGACG CGCTGCCGCG CAACGAAACC GGCAAACTGG CGCGCGATGT GCTGGCCGCG CTGATCGCGC AGCATTCGCA CCGCAACGCA CACAAGCACG GCATGCGCTT CACGATTCCC GCTGATCACC CCGCGCTGCC GGGGCACTTT CCTGGCCATC CGATCGTGCC GGGCGTGGTG CTGCTCGACC ATGCGCTTCA CACGATCGGT GCGGCGCAGG GCCGCTCGCT TGATGCGTGC AAGATCAACT CGGCCAAGTT TCTCAGTCCT GCGGCACCCG GGGAAGTGCT CGATCTCGCG TTCGAGACGA CGGCAAGCAA TGCCGTGCGC TTCACAATCC GCGCGGGCGA ACGTGAAGTG GCCAGCGGCG TGCTGTCTGC CCCGGCACCG GAGGGCGTTG CCGCATGA
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Protein sequence | MPTYPLVSHS TLDHTLAWRD GTPVSARAFL ADVMALAPML PPGGHVFNAC ADRYRFAVGL CATLVAGKIS LLPPMQTPQM VRQLSAFAPD VFCLHDAAAC PVDLPGFCYP DALDADTAPI DVPQIDASQI MAVLFTSGST GTPVPHRKTW GALVRCMRTA VDHLGLGDGR AFTLVGTVPA QHMYGFEVTV LLALQGGLAF SNRQPFYPAD IREALDAVPQ PRVLVTSPVH LRALLASEAA LPSASLVLSA TAPLSEALAR EAETRLSAPL LEIYGSTETG QVATRRTAQE TAWHLYPGVR MESRAGTPAD EGPTVWVYGE HVETPVPMGD AIELIDDTHF LLHGRKADLI NIAGKRSSLA YLNHQLNAIA GVVDGVFYMP NDAPAAPHKH GSAAVTRLVA LVVAPGLSAA DVLRALHDRI DAAFMPRPLL LVDALPRNET GKLARDVLAA LIAQHSHRNA HKHGMRFTIP ADHPALPGHF PGHPIVPGVV LLDHALHTIG AAQGRSLDAC KINSAKFLSP AAPGEVLDLA FETTASNAVR FTIRAGEREV ASGVLSAPAP EGVAA
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