Gene Rpic12D_0320 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0320 
Symbol 
ID8017944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp330188 
End bp331885 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content68% 
IMG OID644829099 
ProductBeta-hydroxyacyl-(acyl-carrier-protein) dehydratase FabA/FabZ 
Protein accessionYP_002980298 
Protein GI241661938 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGACTT ACCCGCTGGT CTCCCATTCA ACGCTCGACC ACACGCTTGC CTGGCGTGAC 
GGCACGCCCG TCTCCGCACG CGCGTTCCTG GCAGATGTGA TGGCGCTGGC CCCGATGCTG
CCGCCGGGCG GCCACGTATT CAATGCCTGC GCAGACCGTT ACCGCTTTGC CGTCGGGCTG
TGCGCAACGC TGGTGGCCGG AAAGATCAGC TTGCTGCCGC CCATGCAGAC GCCGCAGATG
GTGCGTCAGC TTTCGGCATT CGCGCCGGAT GTGTTCTGCC TGCACGACGC GGCGGCCTGC
CCCGTCGACC TGCCGGGCTT TTGTTATCCC GATGCGTTGG ATGCCGACAC CGCGCCCATC
GACGTGCCGC AGATCGACGC CTCGCAAATC ATGGCGGTGC TGTTTACGTC CGGATCGACG
GGCACGCCGG TGCCGCATCG CAAGACGTGG GGCGCGCTGG TGCGCTGCAT GCGCACGGCC
GTCGACCATC TCGGCCTGGG CGACGGGCGC GCGTTCACGC TGGTCGGCAC CGTGCCGGCG
CAGCACATGT ACGGCTTTGA GGTGACGGTG CTGCTGGCGC TGCAAGGTGG CCTGGCGTTC
AGCAACCGGC AGCCGTTCTA TCCGGCGGAC ATTCGCGAGG CGCTGGACGC CGTACCGCAG
CCGCGCGTGC TGGTGACCTC GCCGGTGCAT CTGCGAGCGC TGCTGGCATC GGAGGCCGCC
TTGCCGAGCG CATCGCTCGT GCTGTCGGCC ACTGCGCCGC TCTCGGAGGC GCTGGCGCGC
GAGGCCGAGA CGCGCTTATC CGCGCCGCTC CTGGAGATTT ACGGCAGCAC CGAAACCGGC
CAGGTGGCGA CGCGCCGCAC CGCGCAGGAA ACGGCGTGGC ACCTGTACCC CGGCGTTCGC
ATGGAATCGC GCGCCGGCAC GCCGGCAGAC GAAGGCCCGA CGGTGTGGGT CTATGGCGAA
CACGTCGAAA CCCCGGTACC GATGGGTGAC GCGATCGAAC TGATCGACGA CACGCACTTT
CTCCTGCACG GGCGCAAGGC CGATCTGATC AACATTGCAG GCAAGCGGTC GTCGCTGGCG
TATCTGAACC ATCAACTCAA CGCGATTGCC GGTGTGGTGG ACGGCGTGTT CTACATGCCG
AACGATGCGC CCGCCGCCCC GCACAAGCAC GGCAGCGCGG CAGTCACGCG CCTGGTGGCG
CTGGTTGTGG CGCCGGGCCT CAGCGCGGCG GATGTGCTGC GTGCCCTGCA CGACCGCATC
GACGCAGCGT TTATGCCGCG TCCGCTGCTG CTGGTGGACG CGCTGCCGCG CAACGAAACC
GGCAAACTGG CGCGCGATGT GCTGGCCGCG CTGATCGCGC AGCATTCGCA CCGCAACGCA
CACAAGCACG GCATGCGCTT CACGATTCCC GCTGATCACC CCGCGCTGCC GGGGCACTTT
CCTGGCCATC CGATCGTGCC GGGCGTGGTG CTGCTCGACC ATGCGCTTCA CACGATCGGT
GCGGCGCAGG GCCGCTCGCT TGATGCGTGC AAGATCAACT CGGCCAAGTT TCTCAGTCCT
GCGGCACCCG GGGAAGTGCT CGATCTCGCG TTCGAGACGA CGGCAAGCAA TGCCGTGCGC
TTCACAATCC GCGCGGGCGA ACGTGAAGTG GCCAGCGGCG TGCTGTCTGC CCCGGCACCG
GAGGGCGTTG CCGCATGA
 
Protein sequence
MPTYPLVSHS TLDHTLAWRD GTPVSARAFL ADVMALAPML PPGGHVFNAC ADRYRFAVGL 
CATLVAGKIS LLPPMQTPQM VRQLSAFAPD VFCLHDAAAC PVDLPGFCYP DALDADTAPI
DVPQIDASQI MAVLFTSGST GTPVPHRKTW GALVRCMRTA VDHLGLGDGR AFTLVGTVPA
QHMYGFEVTV LLALQGGLAF SNRQPFYPAD IREALDAVPQ PRVLVTSPVH LRALLASEAA
LPSASLVLSA TAPLSEALAR EAETRLSAPL LEIYGSTETG QVATRRTAQE TAWHLYPGVR
MESRAGTPAD EGPTVWVYGE HVETPVPMGD AIELIDDTHF LLHGRKADLI NIAGKRSSLA
YLNHQLNAIA GVVDGVFYMP NDAPAAPHKH GSAAVTRLVA LVVAPGLSAA DVLRALHDRI
DAAFMPRPLL LVDALPRNET GKLARDVLAA LIAQHSHRNA HKHGMRFTIP ADHPALPGHF
PGHPIVPGVV LLDHALHTIG AAQGRSLDAC KINSAKFLSP AAPGEVLDLA FETTASNAVR
FTIRAGEREV ASGVLSAPAP EGVAA