| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0309 |
|---|
| Symbol | |
|---|
| ID | 8017933 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Ralstonia pickettii 12D |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012856 |
|---|
| Strand | + |
|---|
| Start bp | 319567 |
|---|
| End bp | 320358 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 644829088 |
|---|
| Product | oxidoreductase molybdopterin binding |
|---|
| Protein accession | YP_002980287 |
|---|
| Protein GI | 241661927 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG2041] Sulfite oxidase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.261244 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGATAT TCAAAGCTCC CAGATTCGAC GGCATTGATG GTGACGCTGC GCTCATCGAG
GCACGCCGGC AGATTGCCCG TCACGTCAAC CTGCCCGCGC GTCGTACTTT CCTGCAGCGC
TCGCTCACGC TGGGCGGCCT GTCGCTGCTG ACCGGCTGCA GCATCTCTGA CAACGAGCAG
GTCGAGGCGG CTCTCTCGCG TATCTCACGC TTCAACGACA AGGTTCAGGG CCTGATCTTT
GACCCGAACC AACTGGCCCC CACGTACCCT GACTCGATGA TCACGCGCCC CTTTCCGTTC
AATGCCTACT ACGGCGAGGA TGAGGTGCGC CAAGTTGATG CGCAGGCATG GCGGCTTGAG
GTTACCGGTC TTGTCTCCGA CCGACGTCAA TGGAATCTAG CCGACCTGCG TGCGATGCAA
CAGTACGACC AAGTGACACG CCATATCTGC GTGGAGGGCT GGAGTGCGAT CGGTAAGTGG
GGAGGCGTGC GCTTTGGTGA CTTTCTACGC CGAGTTGGCG CCGACTTGAG CGCCAAATAC
GTCGGTTTCA AGTGCGCTGA CGACTACTAC ACCAGCATCG ACATGGCGAC CGCGCTACAT
CCTCAGACAC TCATGGCCAT AACCTATGAC GGCGCGCCGT TACCTCCGAA GTATGGCTTC
CCGATGAAGC TGCGAATGCC CACCAAGCTG GGCTACAAGA ATCCGAAGCA TATCCAGGCC
ATTTTTGTGA CCAATACCTA TCCCGGTGGC TACTGGGAAG ACCAGGGCTA CAACTGGTTC
GGCGGGAGTT GA
|
|---|
| Protein sequence | MKIFKAPRFD GIDGDAALIE ARRQIARHVN LPARRTFLQR SLTLGGLSLL TGCSISDNEQ
VEAALSRISR FNDKVQGLIF DPNQLAPTYP DSMITRPFPF NAYYGEDEVR QVDAQAWRLE
VTGLVSDRRQ WNLADLRAMQ QYDQVTRHIC VEGWSAIGKW GGVRFGDFLR RVGADLSAKY
VGFKCADDYY TSIDMATALH PQTLMAITYD GAPLPPKYGF PMKLRMPTKL GYKNPKHIQA
IFVTNTYPGG YWEDQGYNWF GGS
|
|---|
| |