Gene Rpic12D_0246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0246 
Symbol 
ID8017869 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp255323 
End bp256414 
Gene Length1092 bp 
Protein Length363 aa 
Translation table11 
GC content65% 
IMG OID644829026 
Productcytochrome oxidase assembly 
Protein accessionYP_002980226 
Protein GI241661866 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG1612] Uncharacterized protein required for cytochrome oxidase assembly 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.241407 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.0193794 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGC AACTTGCTTC CATTGGCATC CTGATCGCGC TGATCCCACT CTGTTACGTG 
CTGGTCAAAG GGGATCGCAA CAAGTATCGC AAGCTGGTGT GGATCACCGC TTTCCTCACG
CTGGACTTGA TCATGTTCGG CAGCTTCACG CGTCTGACGG ATTCAGGCCT CGGTTGCCCG
GATTGGCCGG GCTGCTACGG CACCTCCAAC CCGTTCCACG CCCGTGAAGA CATCCATGCT
GCACAGGCCG CCATGCCGAG CGGCCCCGTC ACCTGGATGA AAGCGTGGAT CGAGATGACG
CACCGCTACT TCGCGCTTGC GTTGGGCGTG CTGATCATCA CGCTGGTGGT GCTGGCGTGG
GTCAAGCGCA AGGAACTGAA GCAGTCTCCC TGGTACGCGA CGGCGGTGCT GGCGCTGGTG
TGTGTGCAAG GCGCCTTTGG TGCGTGGACG GTCACGCTCA AGCTGCAGCC GGCCATCGTG
GTGACGCACT TGCTGCTCGG CATGTCGCTG CTGGCCGCGC TGATCTGGCT CGGCTGCAAG
AACGACGCGC CGCGTGCGGT CGATGAGCGC GGCGCCTCGT TGCGCATGGC GGCGGCCATC
GGGCTCGTGC TGCTCGTTGT GCAGATTGCC CTGGGTGGCT GGGTCAGCAC GAACTACGCT
GTGCTGGCCT GTACCGATTT TCCGCTGTGC AACGGCCAGT GGGTTCCGCC GATGGACTTT
GCGCACGGCT TCACGTTCTG GCGCCAGCTC GGCAAGACCG CCAGCGGCGA TTTCATCTCG
CACGACGCGC TGGTCGCCAT CCATTGGACG CACCGCGTGT TTGCAGTCGT TGTGCTGAGC
TACCTGGCGT GGCTCAGTGC GCGCGCACGT CGCATTGGCG GCCTCGGCCG GGTTGCGACG
GTGCTGCTCG TTGTGCTGGC CGTGCAATTG GCGACCGGGC TTTCGAACAT CGTGCTGGGG
TGGCCGCTGC TGGCCGCCGT GGCGCACAAC GGCGGCGCGG CCGTGCTGCT GTTGCTGATG
GTGCGTCTGC ATTACCTGAT CGGGCTCGCG CAGGCGCGGG CGCCGATGCC TGTGGCGGCT
GCCGTCGTCT GA
 
Protein sequence
MLLQLASIGI LIALIPLCYV LVKGDRNKYR KLVWITAFLT LDLIMFGSFT RLTDSGLGCP 
DWPGCYGTSN PFHAREDIHA AQAAMPSGPV TWMKAWIEMT HRYFALALGV LIITLVVLAW
VKRKELKQSP WYATAVLALV CVQGAFGAWT VTLKLQPAIV VTHLLLGMSL LAALIWLGCK
NDAPRAVDER GASLRMAAAI GLVLLVVQIA LGGWVSTNYA VLACTDFPLC NGQWVPPMDF
AHGFTFWRQL GKTASGDFIS HDALVAIHWT HRVFAVVVLS YLAWLSARAR RIGGLGRVAT
VLLVVLAVQL ATGLSNIVLG WPLLAAVAHN GGAAVLLLLM VRLHYLIGLA QARAPMPVAA
AVV