Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0237 |
Symbol | |
ID | 8017860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 248525 |
End bp | 249781 |
Gene Length | 1257 bp |
Protein Length | 418 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644829017 |
Product | cytochrome c oxidase, subunit II |
Protein accession | YP_002980217 |
Protein GI | 241661857 |
COG category | [C] Energy production and conversion |
COG ID | [COG1622] Heme/copper-type cytochrome/quinol oxidases, subunit 2 |
TIGRFAM ID | [TIGR02866] cytochrome c oxidase, subunit II |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 0.0206186 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAATGT TGAATAAGAC ATTGGCAAGT TTGCTGGCGG CAGGCTCCCT CCTCGCCCTC AGTCAAACGG CCCTGGCAGT GGAAGACATG CCGGGCGGCC CCGCAGTGCG GCAACTCAAT CTCGCGCCAC CGGTCACCAA GATCGCCGCC GAGATCCATT GGCTGCACTG GATGATGCTG ATCATCTGTA TCGTGATCTT CATCGGTGTG TTCGGGGTGA TGTTCTACTC CATTTTCAAG CACCGTAAGT CGGTCGGCCA CAAACCGGCG ACGTTCCACG AAAGCACCAC GGTTGAAATC ATCTGGACCA TTGTGCCGTT CCTGATCGTG ATCGGGATGG CGCTGCCGGC CACCAAGGCC GTGGTCGCAA TGAAGGACAC CACCAATTCC GACCTCACCA TCAAAGCCAC CGGCTACCAG TGGAAGTGGG GTTACGACTA TCTGAAGGGC GAAGGCGAGG GCATCTCGTT CCTCTCCACG CTCACCACGC CGCGCGACCA GATCAACAAC CAGGCGCCCA AGTCGAACAC GTACCTGATC GAAGTCGACA ACGAGCTGGT CGTGCCGGTC AACCGCAAGG TGCGCATCGT CACGACCGCC AACGACGTGA TCCACTCGTG GATGATCCCG GCGTTCGGCG TGAAGCAGGA TGCGATTCCG GGCTTCGTGC GCGACGCATG GTTCAAGGCC GAGAAGGTGG GCATCTATCG CGGGCAGTGC GCTGAGCTTT GCGGCAAGGA ACACGCCTTC ATGCCGATCG TCGTGCGTGT GCTCTCGCAG GACGACTACA CCAAGTGGGT CGACGGCAAG AAGAAGGAAA TGGCCGCGAA GGCCGATGAC CCGAACAAGA CCTACACGCT GGAAGAGCTG AAGTCGCGCG GCGAGAAGGT CTACACCGCC AACTGCGCGG TGTGCCACCA GCCGAACGGC AAGGGTGGTG GTCCGTTCCC GGCGCTCGAT GGTTCGAAGA TCGCCAATGG CCCGCTGGCC GACCACGTTG GCATCGTGCT GCACGGCAAG GGCGCCATGC CGCCCTGGGC TTCGGCGCTG AACGATGTCG AAATCGCTGC CGTCGTAACC TACGAGCGCA ACAACTGGGG CAACCATACC GGTGACCTGC TGCAGCCGAC GCAAGTGAAG GATGCGCGCG GCGGCAAGAT GCCCGAAGGT GGGGCTGCCA AGACCGCTGC AACTGAATCC GCCGGTAAGG TGGCGTCCAA ACAAGCGAAT GCGGCCGAAG ACCGCAACGC TGGCTGA
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Protein sequence | MKMLNKTLAS LLAAGSLLAL SQTALAVEDM PGGPAVRQLN LAPPVTKIAA EIHWLHWMML IICIVIFIGV FGVMFYSIFK HRKSVGHKPA TFHESTTVEI IWTIVPFLIV IGMALPATKA VVAMKDTTNS DLTIKATGYQ WKWGYDYLKG EGEGISFLST LTTPRDQINN QAPKSNTYLI EVDNELVVPV NRKVRIVTTA NDVIHSWMIP AFGVKQDAIP GFVRDAWFKA EKVGIYRGQC AELCGKEHAF MPIVVRVLSQ DDYTKWVDGK KKEMAAKADD PNKTYTLEEL KSRGEKVYTA NCAVCHQPNG KGGGPFPALD GSKIANGPLA DHVGIVLHGK GAMPPWASAL NDVEIAAVVT YERNNWGNHT GDLLQPTQVK DARGGKMPEG GAAKTAATES AGKVASKQAN AAEDRNAG
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