| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0227 |
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| Symbol | |
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| ID | 8017850 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 240361 |
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| End bp | 242013 |
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| Gene Length | 1653 bp |
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| Protein Length | 550 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 644829007 |
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| Product | carboxyl-terminal protease |
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| Protein accession | YP_002980207 |
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| Protein GI | 241661847 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.000791174 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTTATCT ACTGTTCCCA CGTCCACGCT CGACACATGC GAACTTCGCT CAAGAACATC
AGCTTGATCG CCATCGGCCT CGTCACCGGG GTGCTTGCGA CGCTCCAGCT CTCCGCCACT
GCGCAAAACG CGACGGTCGG GCCGCTTCCG CTGGAGAAAC TCAGGCTCAT GGCGGACATC
TTTGGCCAGA TCAAGCGTGA ATATGTCGAG CCGGTGGACG ACGACAAGCT GCTGACCGAA
GCCATCAAGG GTATGGTCGC CAGCCTCGAC CCGCATTCGG CCTACCTCGA CAAGAAGGAT
TTCCAGGAAC TCCAGGAAGG CACCCAGGGC CGCTTCGCCG GTCTGGGCAT CGAGATCTCG
CAGGAAGAAG GCCTGGTCAA GGTCATCAAT CCGATTGAAG ACACCCCAGC CTTCCGCGCT
GGCGTGCAGC CGGGCGACCT GATCACCCGC ATCGACGACA AACCCGTGCG CGGCATGCCG
CTGGAGCAAG CCGTCAAGCG CATGCGCGGC GCGCCGGGAA CCAAGGTCAC GCTCACGATC
TACCGCAAGA AGGAAGAGCG CACGTTCCCG CTGACCATCA CCCGCGCCGA GATCCAGGTG
CAGTCGGTCA AGGCCAAGAT GCTGGACAAC GGCATCGCCT GGGTCCGCAT CACCAGCTTC
CAGGAACGCA CCGTGCCGGA CCTGGCCAAG AAGCTCAACG ACCTGGCCAA GCAGGACGCC
CACCTCAAGG GCCTGATCCT GGATCTGCGC AACAACGGCG GCGGCGTGCT GCAAGCTGCC
GTTGGCGTGT CGGCCGCGTT CCTGCCGCCG GACGTGACGG TGGTGTCGAC CAACGGCCAG
GTGCCGGATG CCAAGCGCAC GTACAAGGCG ACCTTCGCCA ACTACCGCTT GAGCAATCTC
GATTCCGATC CGCTTACCGG CCTGGACCCC GAATTCAAGA CCGTGCCGAT CATTGTGCTG
ACCAACGCCT ACACGGCTTC GGCCTCGGAA ATCGTGGCGG GTGCGCTGCA GGATCATCAC
CGCGCCAAGA CGATGGGCAA GACGACGTTC GGCAAGGGCT CGGTGCAGAC GGTGCGTCCG
CTGTCGAACG ACACCGGCAT CAAGCTGACC ATTGCGTACT ACTACACGCC GTCGGGCAAG
TCGATCCAGG CCAAGGGCAT CCGCCCGGAT ATCCCGGTTG ACCAAAACCC GGACGGCGAC
CCGGACGATG CGCTGATCAC GCGCGAAATC GACACCGAAC GCCACCTGCA CAACAAGCAG
GAATCGGAAG AAGCCGAGAT GACCGAGCGC GAAAAGCGCC GCGTTGAAGA GCTGCGTCGC
CTGGAAGAGG AAAACGCCAA GAAGACGCCC GAGCAGCGCG AGAAGGAACG CAACAAGAAG
CCGATCGAGT TCGGTTCTGC CGAAGACTTC ATGCTGCAGC AGGCCATCGC CGACCTGAAG
GGTCAGCCGG TCAAGCGCTC GAAGTCGGTG CTGGAAGCCG CGGCGGCCGC GGTGCCAGAC
AAGGCGGTGA AGTCGCCGGC GACCAAGGAA TCGAGCGCCC GGGCCAAGCT GCCCAAGGGC
AAGGCTGCGC CGGCTTCCGA GCCGACCGCA CCGAAGCCCA ATGTTCCTGC GAGCGGCGTG
CAGCCTGCCC CGGAACCGAC CGGCGCCCGT TAA
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| Protein sequence | MFIYCSHVHA RHMRTSLKNI SLIAIGLVTG VLATLQLSAT AQNATVGPLP LEKLRLMADI
FGQIKREYVE PVDDDKLLTE AIKGMVASLD PHSAYLDKKD FQELQEGTQG RFAGLGIEIS
QEEGLVKVIN PIEDTPAFRA GVQPGDLITR IDDKPVRGMP LEQAVKRMRG APGTKVTLTI
YRKKEERTFP LTITRAEIQV QSVKAKMLDN GIAWVRITSF QERTVPDLAK KLNDLAKQDA
HLKGLILDLR NNGGGVLQAA VGVSAAFLPP DVTVVSTNGQ VPDAKRTYKA TFANYRLSNL
DSDPLTGLDP EFKTVPIIVL TNAYTASASE IVAGALQDHH RAKTMGKTTF GKGSVQTVRP
LSNDTGIKLT IAYYYTPSGK SIQAKGIRPD IPVDQNPDGD PDDALITREI DTERHLHNKQ
ESEEAEMTER EKRRVEELRR LEEENAKKTP EQREKERNKK PIEFGSAEDF MLQQAIADLK
GQPVKRSKSV LEAAAAAVPD KAVKSPATKE SSARAKLPKG KAAPASEPTA PKPNVPASGV
QPAPEPTGAR
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