Gene Rpic12D_0226 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0226 
Symbol 
ID8017849 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp239541 
End bp240290 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content65% 
IMG OID644829006 
ProductUBA/THIF-type NAD/FAD binding protein 
Protein accessionYP_002980206 
Protein GI241661846 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000578228 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAACGACG ATCAACTGCT GCGGTACTCG CGCCATATCC TGCTCGACGA AATCGGCATC 
GAGGGGCAGA CGCGCCTGCT TGAGAGCCAT GTACTCGTCA TCGGTGCGGG CGGGCTTGGT
GCCGCCGCCC TGCCCTACCT GGCTGCGGCC GGCGTGGGCA CGCTCACCAT CGTCGACGAC
GACACGGTGG ACTTGACGAA TCTGCAGCGC CAGATCATCC ACACAACGGA ATCGGTCGGA
CAACCGAAGG TGGCATCGGC CCAGGCGGCC ATCGCACGAC TGAATCCGGA CGTGCGCGTG
AATGCGTTAC AGCGCCGGCT CGATGCCGAC GCCATTGGCG CGCTGCTTCA AGGCGTGAGC
GTGGTGCTGG ACTGCTCGGA TAACTTCGAC ACCCGCCAGG CCATCAACCT TGCCTGTGTG
CGCGCGGGGC TGCCGCTGGT GTCGGGCGCG GCGATCCGCT TTGACGGACA GATCAGCGTA
TTCGACAGCC GCACCGGCGG CCCCTGCTAC GCCTGTCTGT TCCCGCCTGA CGAGCCCGCG
CCCGAGGTGG CATGCGCAAC GATGGGCGTG TTTTCGCCAC TGGTAGGCAT GGTCGGTACG
GTGCAGGCCA CCGAGGCACT GAAGCTGATT GTCGGGATCG GCCATTCGCT TGCCGGTCGC
CTTCTGATGC TCGACGGTTT AACGATGGAA TGGACGACGA TGCGCATCGC TCGACAGCCG
TCCTGTCCGG TCTGCGGGGG CAAGCACTGA
 
Protein sequence
MNDDQLLRYS RHILLDEIGI EGQTRLLESH VLVIGAGGLG AAALPYLAAA GVGTLTIVDD 
DTVDLTNLQR QIIHTTESVG QPKVASAQAA IARLNPDVRV NALQRRLDAD AIGALLQGVS
VVLDCSDNFD TRQAINLACV RAGLPLVSGA AIRFDGQISV FDSRTGGPCY ACLFPPDEPA
PEVACATMGV FSPLVGMVGT VQATEALKLI VGIGHSLAGR LLMLDGLTME WTTMRIARQP
SCPVCGGKH