Gene Rpic12D_0220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0220 
Symbol 
ID8017843 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp234760 
End bp235731 
Gene Length972 bp 
Protein Length323 aa 
Translation table11 
GC content65% 
IMG OID644829000 
Productglutathione synthetase 
Protein accessionYP_002980200 
Protein GI241661840 
COG category[H] Coenzyme transport and metabolism
[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0189] Glutathione synthase/Ribosomal protein S6 modification enzyme (glutaminyl transferase) 
TIGRFAM ID[TIGR01380] glutathione synthetase, prokaryotic 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0000248825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCGCATCC TGTTCATCGT CGATCCGCTG TCGACGTTCA AGACCTACAA GGATTCCACC 
TTCGCGATGA TGCGTGAGGC GGCGGCGCGC GGCTATGCCA TCTACACGTG CCTGCAGTCG
CAGCTCACGT TGGCGAACAA CGTGGTCGAA ACCGTTGCCA CGCCGATCGC ACTGACCGGC
GACGAGGACG ACTGGTACCG CGCCGGCGAT GCGCGCCTGC TGCCGCTCAC CGGCTTTGAC
GCCGTGCTGA TGCGCAAGGA CCCCCCATTC GACATGGAGT ACGTCACCAG CACGTGGCTG
CTGGAGATTG CCGAGCGGCA GGGCGCGCGC GTGTTCAACA AGCCGCAGGC GATTCGTGAC
CATTCGGAGA AGCTCGCCAT CGCGCAGTTC CGCGAGTTCA CCGTGCCGAC CATCGTGTCC
CGCGATGCCA AGCGTCTGCG CGAATTCCAC GCTGAGCAGG GCGACGTCAT CTTCAAGCCG
CTCGACGGCA TGGGCGGCGC GGGTATCTTC CGCGTGGGAC CGGATGGTCT GAACCTCGGG
GCGGTGATCG AGTCGCTGAC CGACAACGGC GCGCGCACGA TCATGGCGCA ACAGTACATT
CCGGCGATTC GCGAGGGCGA CAAACGCATT CTCCTGATCG GCGGGTCGCC GGTGCCGCAT
TCGCTGGCGC GGGTGCCGAT GGCGGGCGAG GTACGTGGCA ATCTGGCGGC GGGCGGTACG
GGCAGGGCCC AGCCGCTGTC TGAGCGCGAT CAGGTGATCG CACACGCACT TGCGCCCGTG
CTGTGGCAGC GTGGTCTGCT GCTCGTCGGC CTGGATGTCA TTGGTGATTA CCTGACCGAG
GTCAACGTCA CCAGTCCGAC CTGTTTCCAG GAAATCACCC AGCAGACGGG CTTCAACGTG
GCGGGAATGT TCATCGACGC GCTCGAGCGC GCCGCAGGCA AGACGACCGG GATGGGCCGC
AAGCCGGCCT GA
 
Protein sequence
MRILFIVDPL STFKTYKDST FAMMREAAAR GYAIYTCLQS QLTLANNVVE TVATPIALTG 
DEDDWYRAGD ARLLPLTGFD AVLMRKDPPF DMEYVTSTWL LEIAERQGAR VFNKPQAIRD
HSEKLAIAQF REFTVPTIVS RDAKRLREFH AEQGDVIFKP LDGMGGAGIF RVGPDGLNLG
AVIESLTDNG ARTIMAQQYI PAIREGDKRI LLIGGSPVPH SLARVPMAGE VRGNLAAGGT
GRAQPLSERD QVIAHALAPV LWQRGLLLVG LDVIGDYLTE VNVTSPTCFQ EITQQTGFNV
AGMFIDALER AAGKTTGMGR KPA