| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0218 |
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| Symbol | |
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| ID | 8017841 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 231489 |
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| End bp | 233063 |
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| Gene Length | 1575 bp |
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| Protein Length | 524 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644828998 |
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| Product | ammonium transporter |
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| Protein accession | YP_002980198 |
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| Protein GI | 241661838 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0004] Ammonia permease |
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| TIGRFAM ID | [TIGR00836] ammonium transporter
[TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.00000738069 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGAAAACCT GGTTCACACG ATTCCTGACG GCTGGGGCCG TCGCTGCCGT GCTCGCAGGC
GCCGTGATGT CGGCGCCGGC CATTGCACAG GACAAGCCGG CGGCGGAAGC TTCGGCGCCG
GCTGCTGCGG CTGCCGCTTC CGAGCCGGCC GCTGCCGCAC CGGCCGCCGC TGCGCCGGCT
TCAGCACCTG CCGCCGCCGC TGCACCGGCT GCGGCTGCTG CTGCTGCTGC TGCTGCTGCT
GCTGCGCCCG CCGCGGCTAC GCCCGTCCCC AACAAGGGCG ACACGGCGTG GCTGCTCGTC
TCCACCGCCT TCGTCATCCT GATGACGCTG CCGGGCCTGG CGCTGTTCTA CGGCGGCCTG
GTGCGCAAGA AGAACATGCT GTCGGTGCTG ATGCAATGCA CGGGCATCTT CTCGCTCATC
ATCATCCTGT GGGCGATCTA CGGCTACAGC TTCGCATTTA CCGAGGGCAA CGCGTTCTTC
GGCGGGCTTG ATCGCCTGTT CCTGAAGGGC CTGACGCCGG ATTCGGTGGC CGCCACCTTC
AGCAAGGGCG TGGTGGTGCC TGAGTATGCG TACTTCGCCT TCCAGGGTGC GTTTGCGGCG
ATTACGTGCG CGCTGATCAT CGGTGCTTTC GCCGAGCGTG CGAAATTCTC GGCCGTGCTG
CTGTTCGTGG TGCTGTGGTT CACTTTCAGC TACCTGCCGA TCGCGCACAT GGTCTGGTTC
TGGCCGGGTC CGGACGGCTT TACCGACGCC AAGGCGGCCG AGGTGATGAC GGCCAAGTCT
GGCTGGCTGT TCCAGAAGGG CGCGCTGGAC TTTGCCGGCG GTACCGTGGT GCACATCAAT
GCCGCTGTAG CGGGCCTGGT GGGCGCCTTC CTGTTCGGCA AGCGCATCGG CTTTGGCCGT
GAGGCGCTCA AGCCGCACAG CCTGACGCTG ACCATGGTCG GTGCCTCGCT GCTGTGGTTC
GGCTGGTTCG GCTTCAACGC CGGTTCGGCT CTGGAAGCCA ACGGCAGCGC CGCGCTGGCC
TTCGTCAACA CGCTGCTGGC GACCGCCGCT GCCGTGCTGT CGTGGAGCTT CGGCGAGTGG
TTCGGCAAGA GCAAGCCTTC GATGCTGGGT GCCGCATCGG GTGCCGTGGC TGGCCTGGTC
GCCATCACCC CGGCCGCCGG CTTTGTCGGC CCGATGGGTT CGATCGCGCT CGGCATCATC
GCCGGCCTGC TGTGCCTGTG GGGCGTCAAT GGCCTCAAGC GCATGCTAGG CATGGACGAC
ACGCTGGACG TGTTCGGTGT GCACGGCGTG GGCGGTATCC TCGGGGCGCT GTTGACTGGC
GTCTTCGCGG CGCCGAGCCT GGGCGGCACC GGCATCTACG ACTATGTCGC CAACAAGGTA
GCCGACGATT ACTCGATCGG CGGCCAGCTG TGGATCCAGT TCCAGGGCGT GGCGACCACG
GTCATCTGGT CCGCAGTGGT GGCGTTTATC TCGTACAAGA TCGTCGATGC CATTGTTGGC
CTGCGCGTGC CGGAAGAAGA GGAGCGCGAG GGTCTGGACA TCACGTCCCA CGGCGAAACT
GCCTACGAAG ACTGA
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| Protein sequence | MKTWFTRFLT AGAVAAVLAG AVMSAPAIAQ DKPAAEASAP AAAAAASEPA AAAPAAAAPA
SAPAAAAAPA AAAAAAAAAA AAPAAATPVP NKGDTAWLLV STAFVILMTL PGLALFYGGL
VRKKNMLSVL MQCTGIFSLI IILWAIYGYS FAFTEGNAFF GGLDRLFLKG LTPDSVAATF
SKGVVVPEYA YFAFQGAFAA ITCALIIGAF AERAKFSAVL LFVVLWFTFS YLPIAHMVWF
WPGPDGFTDA KAAEVMTAKS GWLFQKGALD FAGGTVVHIN AAVAGLVGAF LFGKRIGFGR
EALKPHSLTL TMVGASLLWF GWFGFNAGSA LEANGSAALA FVNTLLATAA AVLSWSFGEW
FGKSKPSMLG AASGAVAGLV AITPAAGFVG PMGSIALGII AGLLCLWGVN GLKRMLGMDD
TLDVFGVHGV GGILGALLTG VFAAPSLGGT GIYDYVANKV ADDYSIGGQL WIQFQGVATT
VIWSAVVAFI SYKIVDAIVG LRVPEEEERE GLDITSHGET AYED
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