Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0207 |
Symbol | |
ID | 8017830 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 218003 |
End bp | 220915 |
Gene Length | 2913 bp |
Protein Length | 970 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 644828988 |
Product | UvrD/REP helicase |
Protein accession | YP_002980188 |
Protein GI | 241661828 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0210] Superfamily I DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.00182272 |
Plasmid hitchhiking | No |
Plasmid clonability | unclonable |
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Fosmid Coverage information |
Num covering fosmid clones | 2 |
Fosmid unclonability p-value | 0.0000000525372 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCAATAC TCACAGAAAT TAACAGTCTG GTTGAGTCCG AAGGATTGAC ACGCCCACAA GCCAGCGCCG TCGTCGACGA CGCAAGTGCG ATTCTCTGTA TCGCCTGCGC GGGATCAGGA AAATCTCAAA CACTGGCCTA TCGCATCGCC AGGTTAATGC ACCAAGGCGT GCCCCCCAAC ACAATCGTCG CCATCACGTT CACCGAGAAA GCGGCTGACT CCATCAAACG TCGAATAGCT GACGTTTTAG TTCGAACCGG CCAAAGCCCC AACCTAATAG GGCAGATGTT TATCGGAACT ATCCACGCGT TCTGCCAGAA CGTGCTGGCG GACGCCGACG CAATCTTTCG CCAGTACGAC GTGCTCGATG GGAACCGATT CATGCTGTAC CTCATTTCTA GGTACTATGA CCTCGGCATA TCGGACCTCC GTCCAAGGTT CAAGGATCGG TACTTCGAAA CGCTCGAAAA CGTCCGAAAT GCGTGGAACA TCTACCGCGA CGAAGGCCTT TCCATTGCCG AAATCGATGC CAGCGACGCG CAGTTGGGGA AAACACTTCG GTCTATCCAA GACGGCCTTG CTCGTGACCA GTTCATTGAC TTTGCGTCGA TGGTCCGTGA AGTGGCAGAC CGTTCGCAAT CGGCGGGAAG GGTGCGCGAA CGTCTCGCAT CTATTCGGCA TCTCCTGATC GACGAGTATC AAGACGTATC CGGTGCGCAG GAAGAACTTG TCGCTGCTGT TCACAGTTTA GGGGGAAGCA TTTTCGTCGT AGGCGACGAT GATCAATCGA TCTACGGTTG GCGTGGCGCC CATGTGGCCA ATATCCTCGA ATTCGAGGAC CGCTACCCGA ACGTGAGCCG ACACGTTCTA GACATCAACT TCCGCAGCAC GCGCGCCATT GTGGAGACTT CCAATGCGTT CGCGGCAGCT CAGCTTGGCC CGCAGCGACT GCCAAAGCAA CCGGAAGCCT ATGCAGACCA GGGACCGCGA CAACTACTGG TCCACCACTT CCCAACACGA GCGGAGGAAG CCGAGTGGGT CGCAGACCGT ATCGCTACCC TCATCGGAGC GGAATACAAG AAGAGGCCGG ATGACCCCGG ACGCGGCTTG ACTCCGGCGG ATTTCGCAAT CCTTATGCGA TCCACAAAAT CGCCTGAGCA GGACGGCAGT CCTCGACACG CGGCGTTTTC CGATGCTCTT GCCATGCGCG GCATCGACTT CACGTTAAGC GCCGGCGGAA GTGTCTTTGA TCGACCGGCT GTACAGGCGT TGCGAGAGGT TTTTTCCGCG CTAGAGCAAG GAACCATCGA TCGGAATTTG GCCGATGCCT TGGTCACAGA GCACATTCGC CCCGCTTATC CGCATGTAAA CGTAAGGGAG ACCTACAACG TCCTGGCGGA GTGGGGGCGA CGTATTCACC AGCCAGCTGG CTCTGCGCGA CAACGGCTGT TCCCGCAGGA TCTCCTATTC GATCTACTCG AAGCATTTGG CTTGGCGAAA TCCGACTTCG ATGAAGACGT CATGAGGGAC ATCGGGCTGT TCAGCCGTAT GCTGCAGGAT GTCGAATCCG TCTACCTCAG CGTAGATTCG ACGAACCGCT TCCGCGCCGT AGTGCGATTC CTTCAACAAG TTGCCGACAA GGGTTATGAC GTCAGCACAA AGGATTCAGT GTCACGCCCG AACGCGGTAA CCATCTCCAC TGTCCACCAA GTGAAAGGGC TGGAGTTTCC AGTGGTGTTT GTCGTGGACG TTGTACCTGG ACGCTTCCCC GGCAAACAAT CGAGTTTTGA CTCACTGCTG CCTGCCAATC TCATGGCGTC AGCAATTGCC CACGGCGCCT ATACCAACAA TGTCTTTGCA GAAGCACGCC TGTTCTATAC AGCAATGACG CGGGCGGAGC GGTTCCTGCA TGTCACAGGC GCGGCGCTAC TGCCAAATGG AAAGCGCTCC AACCGGCAAT CCACATTTGC TGCCGCGCTG AAAGATATCG AGCTTTGCAC AGACCCGACG CGCTTGCCGG AAGACCTGAA CCGAGCGCCC CAGGAGAGAG ATGCCGAAGA AGCTACGCTG CCCACTTCGT TCTCTGACGT TAAGTACTAT CTAAACTGCC CCAAGAACTA TCAGTTTCGA AAGAGTTATG GATTCAGTCC ACGAGTCCCT GAACTTTTCG GCTATGGCAC CGTTGTCCAC GTCGCCATCG AAAAGCTCCA TGAGATGTTT CGCGACAGAG CGCCGACTCC TGATGAGGCA CAAGCCGTCG CGGAGCAGAA CTTCCATTTG AAGCATGTTG CTCCTAGCCG TGACCCCGAA ACTCGCCCCG GTGCCTATGA GCAAGCCAAG GAGAAGGCTC GCAAAATCGC TGGTGAGTAC GTACAGCAGT ATGGGACCGA TTTCGTTCAA CAACGGCAGG TAGAAGTTAG GTTCGAAATC CCAGCTCGCG GATGCCTGAT TACAGGCGCT ATAGACCTGC TTATGAAATG CGACGATGTC GGCGAAATCG TCGAGGCACA CGTTCTGGAC TTCAAGACAA TGGAGGGCGG AAAAGATCCC TTAGCGAACG CGAAGCTTGA TTGGAGAGAA TTGTCTCTTC AGGTACAGCT CTACGCTAAG GCGGCGCGAG AGGTCTACAG TGAGAACGCA GCGACCGGTT CCATACACTT GCTGAAGGAC AATCGCCGCA TTGAAATCCC GATTGATCCG GAATCGGTCA ATGCTGCGAT CAAGAACGTC GAATGGGCGG TGCAAGGCAT CTTGGATCAA GACTTCCCAA TGCGCCCATC AACACAGAAA TGCGAAGCGT GTGACTTCCA TAGACTCTGC CCTAAACAGA AACAAGACTT CCATCCTGGC ATGGGCAAAC CTCCAAAAAT CAATACTCCG GCTGGTCCGC AACTGACCTC TGCTCTGGAG TAA
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Protein sequence | MPILTEINSL VESEGLTRPQ ASAVVDDASA ILCIACAGSG KSQTLAYRIA RLMHQGVPPN TIVAITFTEK AADSIKRRIA DVLVRTGQSP NLIGQMFIGT IHAFCQNVLA DADAIFRQYD VLDGNRFMLY LISRYYDLGI SDLRPRFKDR YFETLENVRN AWNIYRDEGL SIAEIDASDA QLGKTLRSIQ DGLARDQFID FASMVREVAD RSQSAGRVRE RLASIRHLLI DEYQDVSGAQ EELVAAVHSL GGSIFVVGDD DQSIYGWRGA HVANILEFED RYPNVSRHVL DINFRSTRAI VETSNAFAAA QLGPQRLPKQ PEAYADQGPR QLLVHHFPTR AEEAEWVADR IATLIGAEYK KRPDDPGRGL TPADFAILMR STKSPEQDGS PRHAAFSDAL AMRGIDFTLS AGGSVFDRPA VQALREVFSA LEQGTIDRNL ADALVTEHIR PAYPHVNVRE TYNVLAEWGR RIHQPAGSAR QRLFPQDLLF DLLEAFGLAK SDFDEDVMRD IGLFSRMLQD VESVYLSVDS TNRFRAVVRF LQQVADKGYD VSTKDSVSRP NAVTISTVHQ VKGLEFPVVF VVDVVPGRFP GKQSSFDSLL PANLMASAIA HGAYTNNVFA EARLFYTAMT RAERFLHVTG AALLPNGKRS NRQSTFAAAL KDIELCTDPT RLPEDLNRAP QERDAEEATL PTSFSDVKYY LNCPKNYQFR KSYGFSPRVP ELFGYGTVVH VAIEKLHEMF RDRAPTPDEA QAVAEQNFHL KHVAPSRDPE TRPGAYEQAK EKARKIAGEY VQQYGTDFVQ QRQVEVRFEI PARGCLITGA IDLLMKCDDV GEIVEAHVLD FKTMEGGKDP LANAKLDWRE LSLQVQLYAK AAREVYSENA ATGSIHLLKD NRRIEIPIDP ESVNAAIKNV EWAVQGILDQ DFPMRPSTQK CEACDFHRLC PKQKQDFHPG MGKPPKINTP AGPQLTSALE
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