Gene Rpic12D_0196 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0196 
Symbol 
ID8017819 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp207194 
End bp207751 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content62% 
IMG OID644828978 
ProductRedoxin domain protein 
Protein accessionYP_002980178 
Protein GI241661818 
COG category[C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0526] Thiol-disulfide isomerase and thioredoxins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0104775 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCTCGA CCCTGACTCC TTCTGCAGCC CCGGTATCTG GCGCCACCTC AGGCGGGCGC 
CGCTGGCTGC TTCCCGTGAT CGTGCTGGTG CTGGCCGTGG CCGGCTGGTT CGGCTGGCGT
GCGTTTTCGC CGTCGCAGCA GGTCCCGGCT GCGACCTTCA CGCTGCTGGA TGGGCAAAAG
CTTTCGACGC AAGACCTGAA GGGCAAGGTC TATCTCGTCA ACTTCTGGGC CACGAGTTGC
ACCACCTGCA TCAAGGAAAT GCCCAACATG GTCCAGACGT ACAACAAGTA CAAAGGCGAA
GGCCTGGAAT ACGTGGCTGT GGCGATGAGC TACGACGCGC CAATGTATGT GATGAACTTC
AGCCAGACGC GCCAATTGCC CTTCAAGGTC GCGATGGATG CCGATGGCTC AGCCGCCAAG
GCCTTCGGCG ACGTGCAGCT CACGCCGACC ACGTTCCTGG TGGACCGCGA CGGCCGCATC
CTGAAGCGCT ACGTAGGTGA GCCGGAATGG TCATCGTTCG ACGCGTTGCT CAAGCAGACG
CTGGGCAAGC AGGCCTGA
 
Protein sequence
MASTLTPSAA PVSGATSGGR RWLLPVIVLV LAVAGWFGWR AFSPSQQVPA ATFTLLDGQK 
LSTQDLKGKV YLVNFWATSC TTCIKEMPNM VQTYNKYKGE GLEYVAVAMS YDAPMYVMNF
SQTRQLPFKV AMDADGSAAK AFGDVQLTPT TFLVDRDGRI LKRYVGEPEW SSFDALLKQT
LGKQA