Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0190 |
Symbol | |
ID | 8017813 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 200040 |
End bp | 200687 |
Gene Length | 648 bp |
Protein Length | 215 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644828972 |
Product | hypothetical protein |
Protein accession | YP_002980172 |
Protein GI | 241661812 |
COG category | [R] General function prediction only |
COG ID | [COG2945] Predicted hydrolase of the alpha/beta superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.479373 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.406587 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGTTC ATACCGAAGA ACGCCTGATT CCGGGCCCCG TCGGGCAGAT CGACCTGTCG ATCGACCAGC CGGACACCGC CCTGCGCGGC CTGGCGCTGA TCGGCCATCC GCATCCGCTG TTCGGCGGCA CCAAGGACAA CAAGGTCGCG CAGACGCTGG CACGCACCTT CGTCGGCCTG GGCTACGCGA CGGTGCGCCT GAATTTTCGC GGCGTAGGCA AGACCGAAGG CACGCACGAC AACGGCATCG GCGAGCAGGA CGACATGCTG GCCGTGCTCG ACTGGATGCG TACACAGACC GAATGGTCTG CCGATGTCGC CACGCTGCCC CTGGCACTGG GCGGCTTTTC GTTCGGCAGC TTTGTCGTGT CCCAGGTGGC ACGCCGCCTG GCCGAAGCCG GCACACCCGC CGAGCGCCTG GCGCTGGTCG GGACCGCCAC CTCGCGCTGG GACGTTGCGC CGGTGCCGGC CGACACCATC ATCATTCACG GCGAACAGGA TGACACCGTG CCGCTGATCG ACGTGCTCAA CTGGGCGCGC CCGCAGGAGC TGCCCGTGAT CGTCATCCCG GGCGCCGATC ATTTCTTCCA TCGCAAGCTG CATCTGATCC GGCAGCTCAT TACAGGCGCC TGGGCGCCAA AACCGTAA
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Protein sequence | MNVHTEERLI PGPVGQIDLS IDQPDTALRG LALIGHPHPL FGGTKDNKVA QTLARTFVGL GYATVRLNFR GVGKTEGTHD NGIGEQDDML AVLDWMRTQT EWSADVATLP LALGGFSFGS FVVSQVARRL AEAGTPAERL ALVGTATSRW DVAPVPADTI IIHGEQDDTV PLIDVLNWAR PQELPVIVIP GADHFFHRKL HLIRQLITGA WAPKP
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