Gene Rpic12D_0190 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0190 
Symbol 
ID8017813 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp200040 
End bp200687 
Gene Length648 bp 
Protein Length215 aa 
Translation table11 
GC content66% 
IMG OID644828972 
Producthypothetical protein 
Protein accessionYP_002980172 
Protein GI241661812 
COG category[R] General function prediction only 
COG ID[COG2945] Predicted hydrolase of the alpha/beta superfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.479373 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.406587 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGTTC ATACCGAAGA ACGCCTGATT CCGGGCCCCG TCGGGCAGAT CGACCTGTCG 
ATCGACCAGC CGGACACCGC CCTGCGCGGC CTGGCGCTGA TCGGCCATCC GCATCCGCTG
TTCGGCGGCA CCAAGGACAA CAAGGTCGCG CAGACGCTGG CACGCACCTT CGTCGGCCTG
GGCTACGCGA CGGTGCGCCT GAATTTTCGC GGCGTAGGCA AGACCGAAGG CACGCACGAC
AACGGCATCG GCGAGCAGGA CGACATGCTG GCCGTGCTCG ACTGGATGCG TACACAGACC
GAATGGTCTG CCGATGTCGC CACGCTGCCC CTGGCACTGG GCGGCTTTTC GTTCGGCAGC
TTTGTCGTGT CCCAGGTGGC ACGCCGCCTG GCCGAAGCCG GCACACCCGC CGAGCGCCTG
GCGCTGGTCG GGACCGCCAC CTCGCGCTGG GACGTTGCGC CGGTGCCGGC CGACACCATC
ATCATTCACG GCGAACAGGA TGACACCGTG CCGCTGATCG ACGTGCTCAA CTGGGCGCGC
CCGCAGGAGC TGCCCGTGAT CGTCATCCCG GGCGCCGATC ATTTCTTCCA TCGCAAGCTG
CATCTGATCC GGCAGCTCAT TACAGGCGCC TGGGCGCCAA AACCGTAA
 
Protein sequence
MNVHTEERLI PGPVGQIDLS IDQPDTALRG LALIGHPHPL FGGTKDNKVA QTLARTFVGL 
GYATVRLNFR GVGKTEGTHD NGIGEQDDML AVLDWMRTQT EWSADVATLP LALGGFSFGS
FVVSQVARRL AEAGTPAERL ALVGTATSRW DVAPVPADTI IIHGEQDDTV PLIDVLNWAR
PQELPVIVIP GADHFFHRKL HLIRQLITGA WAPKP