Gene Rpic12D_0132 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0132 
Symbol 
ID8017755 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp141425 
End bp142555 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content66% 
IMG OID644828914 
Productacyl-CoA dehydrogenase domain protein 
Protein accessionYP_002980114 
Protein GI241661754 
COG category[I] Lipid transport and metabolism 
COG ID[COG1960] Acyl-CoA dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGA CCCAAGAGCA AGAGATGATT CGTGACGCCA TCCGCACCTT CGTGCGCGAG 
GCGATCACCC CGCACGCTGC CGCATGGGAC CGCGATGCGA CGTTCCCGAA AGACGTGCAC
CGCCAGCTCG GCGAGCTGGG CGCCTATGGC GTGGCTGTGC CGGAAGAACT CGGTGGCGCG
GGGCTCGACT ACCTGTCGCT GGCGCTGATC CTGGAAGAGA TTGCTGCCGG CGACGGTGGC
ACCTCCACCG TCGTCAGCGT GAACAACTGC CCCGTGTGCA GCATGCTGAT GGCGTTTGCG
AACGACGCGC AAAAGCAGCA GTGGCTCGTG CCGCTGGCGC GCGGCGAGAT GCTCGGCGCG
TTCTGCCTGA CCGAGCCGCA CGTCGGCTCC GACGCATCGG CGCTGCGCAC CACGGCCGTG
CGCGATGGCG ACCACTGGGT CTTGAACGGC GTGAAGCAGT TCATCACCAG CGGCAAGCAT
GCCGACGTGG GGATCGTCAT GGCTGTGACG GACAAAGCTG CAGGCAAGCG CGGCATCAGC
GCGTTCCTGG TGCCGACCAA GACGCCGGGC TACATCGTCG CGCGACTCGA AGACAAACTC
GGCCAGCACT CGTCCGACAC GGCGCAGATC GTGTTCGAAG ACTGCCGCAT CCCCGCCGAT
TGCCTGTTGG GCGAAGAAGG CGCGGGCTAC AAGATGGCGC TGTCCGGGCT GGAAGGCGGC
CGCATCGGCA TTGCCGCGCA GAGCGTGGGC ATGGCGCGTG CGGCCTTTGA GGCAGCGCTG
GCGTATGCCA AGGAGCGCGA AAGTTTCGGC CAGCCGCTGT TCGCGCACCA GGCCGTGCAG
TTCCGCCTGG CCGAGATGGC GACGCGTGTG GACGTCGCGC GGCAGATGGT CTGGCATGCC
GCCAGCCTGA AGGACGCCGG CCTGCCGTGC CTGAAAGAAG CGGCCATGGC CAAGCTCAAC
GCCAGCGAGA TGGCCGAACG CGTGTGCTCC GACGCCATCC AGGTCTTCGG TGGTTACGGC
TACGTCAGCG ACTTCCCGGT GGAGCGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC
GAGGGCACGA GCGATATCCA GAAAATCTTG ATCGCCCGCG CGCTGGCGTA G
 
Protein sequence
MLLTQEQEMI RDAIRTFVRE AITPHAAAWD RDATFPKDVH RQLGELGAYG VAVPEELGGA 
GLDYLSLALI LEEIAAGDGG TSTVVSVNNC PVCSMLMAFA NDAQKQQWLV PLARGEMLGA
FCLTEPHVGS DASALRTTAV RDGDHWVLNG VKQFITSGKH ADVGIVMAVT DKAAGKRGIS
AFLVPTKTPG YIVARLEDKL GQHSSDTAQI VFEDCRIPAD CLLGEEGAGY KMALSGLEGG
RIGIAAQSVG MARAAFEAAL AYAKERESFG QPLFAHQAVQ FRLAEMATRV DVARQMVWHA
ASLKDAGLPC LKEAAMAKLN ASEMAERVCS DAIQVFGGYG YVSDFPVERI YRDVRVCQIY
EGTSDIQKIL IARALA