Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0132 |
Symbol | |
ID | 8017755 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 141425 |
End bp | 142555 |
Gene Length | 1131 bp |
Protein Length | 376 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 644828914 |
Product | acyl-CoA dehydrogenase domain protein |
Protein accession | YP_002980114 |
Protein GI | 241661754 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1960] Acyl-CoA dehydrogenases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGCTGA CCCAAGAGCA AGAGATGATT CGTGACGCCA TCCGCACCTT CGTGCGCGAG GCGATCACCC CGCACGCTGC CGCATGGGAC CGCGATGCGA CGTTCCCGAA AGACGTGCAC CGCCAGCTCG GCGAGCTGGG CGCCTATGGC GTGGCTGTGC CGGAAGAACT CGGTGGCGCG GGGCTCGACT ACCTGTCGCT GGCGCTGATC CTGGAAGAGA TTGCTGCCGG CGACGGTGGC ACCTCCACCG TCGTCAGCGT GAACAACTGC CCCGTGTGCA GCATGCTGAT GGCGTTTGCG AACGACGCGC AAAAGCAGCA GTGGCTCGTG CCGCTGGCGC GCGGCGAGAT GCTCGGCGCG TTCTGCCTGA CCGAGCCGCA CGTCGGCTCC GACGCATCGG CGCTGCGCAC CACGGCCGTG CGCGATGGCG ACCACTGGGT CTTGAACGGC GTGAAGCAGT TCATCACCAG CGGCAAGCAT GCCGACGTGG GGATCGTCAT GGCTGTGACG GACAAAGCTG CAGGCAAGCG CGGCATCAGC GCGTTCCTGG TGCCGACCAA GACGCCGGGC TACATCGTCG CGCGACTCGA AGACAAACTC GGCCAGCACT CGTCCGACAC GGCGCAGATC GTGTTCGAAG ACTGCCGCAT CCCCGCCGAT TGCCTGTTGG GCGAAGAAGG CGCGGGCTAC AAGATGGCGC TGTCCGGGCT GGAAGGCGGC CGCATCGGCA TTGCCGCGCA GAGCGTGGGC ATGGCGCGTG CGGCCTTTGA GGCAGCGCTG GCGTATGCCA AGGAGCGCGA AAGTTTCGGC CAGCCGCTGT TCGCGCACCA GGCCGTGCAG TTCCGCCTGG CCGAGATGGC GACGCGTGTG GACGTCGCGC GGCAGATGGT CTGGCATGCC GCCAGCCTGA AGGACGCCGG CCTGCCGTGC CTGAAAGAAG CGGCCATGGC CAAGCTCAAC GCCAGCGAGA TGGCCGAACG CGTGTGCTCC GACGCCATCC AGGTCTTCGG TGGTTACGGC TACGTCAGCG ACTTCCCGGT GGAGCGCATC TACCGCGACG TGCGCGTGTG CCAGATCTAC GAGGGCACGA GCGATATCCA GAAAATCTTG ATCGCCCGCG CGCTGGCGTA G
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Protein sequence | MLLTQEQEMI RDAIRTFVRE AITPHAAAWD RDATFPKDVH RQLGELGAYG VAVPEELGGA GLDYLSLALI LEEIAAGDGG TSTVVSVNNC PVCSMLMAFA NDAQKQQWLV PLARGEMLGA FCLTEPHVGS DASALRTTAV RDGDHWVLNG VKQFITSGKH ADVGIVMAVT DKAAGKRGIS AFLVPTKTPG YIVARLEDKL GQHSSDTAQI VFEDCRIPAD CLLGEEGAGY KMALSGLEGG RIGIAAQSVG MARAAFEAAL AYAKERESFG QPLFAHQAVQ FRLAEMATRV DVARQMVWHA ASLKDAGLPC LKEAAMAKLN ASEMAERVCS DAIQVFGGYG YVSDFPVERI YRDVRVCQIY EGTSDIQKIL IARALA
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