| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0130 |
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| Symbol | |
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| ID | 8017753 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 140015 |
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| End bp | 140713 |
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| Gene Length | 699 bp |
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| Protein Length | 232 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 644828912 |
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| Product | HAD-superfamily hydrolase, subfamily IA, variant 3 |
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| Protein accession | YP_002980112 |
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| Protein GI | 241661752 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCAG TGACCTCCTC TGTTTCAAAC CACCCGCGCT TTGACGCGAT CCTCTTCGAT
TGCGACGGCG TGCTGGTCGA CAGCGAACCC ATCGTCAACC GGCTGATCTG GGAGATGCTG
ATCGAGCTTG GCATCGACAT CAGCCTGGAA GATTCCATCC AGCGTTTCCT CGGCAAGGCC
ATCCGCGAAG AGCTGGATGC GATTGCCGAG ATGCGCGGCG CACCGCTGCC GCCGAACTGG
TTGTCCACCT TCCAGGCGCG ACGCAACGTG CTGCTCGAAG CCGAAGTGGA AGCCGTGCCG
CATATCGGGC ACGCCATCGA TGTGCTCTCC AGGCTCGGCC TGCCGATGGC CGTGGCTTCC
GGCGCGGATC GCATGAAGGT CGAGCTTCAA CTCAACCGCA CCGGGCTGAT CGAGCACTTC
CAGCCCACGG ACGTGCGCAT TTTTTCGGCC ACGGAAGTCG CACGCAGCAA GCCCGCACCC
GACGTGTATC TGCTGGCCGC CAGCAGCTTG GGGGTATCGC CGTCGCGCTG CCTGGTGATC
GAAGACAGCC CCACGGGCGT TACCGCTGGG CACGCTGCCG GCATGACGGT GCTGGCATAC
GCGGGCCGCA ACGCGCCCGG CCCGTTGATC GCCGCTGGCG CGGCGCGCAC GTTTACCGAC
ATGCGCGAGC TGCCGGAACT GCCGGAGTTG CTGGCCTGA
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| Protein sequence | MTAVTSSVSN HPRFDAILFD CDGVLVDSEP IVNRLIWEML IELGIDISLE DSIQRFLGKA
IREELDAIAE MRGAPLPPNW LSTFQARRNV LLEAEVEAVP HIGHAIDVLS RLGLPMAVAS
GADRMKVELQ LNRTGLIEHF QPTDVRIFSA TEVARSKPAP DVYLLAASSL GVSPSRCLVI
EDSPTGVTAG HAAGMTVLAY AGRNAPGPLI AAGAARTFTD MRELPELPEL LA
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