| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0115 |
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| Symbol | |
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| ID | 8017738 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 124222 |
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| End bp | 126216 |
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| Gene Length | 1995 bp |
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| Protein Length | 664 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 644828897 |
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| Product | Carbamoyl-phosphate synthase L chain ATP-binding |
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| Protein accession | YP_002980097 |
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| Protein GI | 241661737 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG4770] Acetyl/propionyl-CoA carboxylase, alpha subunit |
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| TIGRFAM ID | [TIGR00514] acetyl-CoA carboxylase, biotin carboxylase subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.951631 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCCGCCC CGCATGCCGC CTTCCGCTCG GTCCTCATCG CCAACCGGGG CGAGATCGCT
TTGCGCATCA TGCGCACGGC GCGTCGCCTT GGCATGCGCA CCGTTGCCGT GTATTCCGAC
GCTGACCGCG ATGCGCCGCA TTGCCGCGCG GCCGATCTGG CGTTGCCGAT CGGCGCGTCG
CAACCGCAGG CGTCGTACCT GAACGTTGCG GCGTTGCTGG AGGCCGCGCG CAAGTCGGGT
GCGCAGGCGG TCCATCCGGG TTACGGCTTC CTTGCAGAGA GCGATGCCTT TGCCGGCGCA
TGCGCGGATG CCGGCCTCGT CTTCATCGGG CCACCTGCGG GGGCCATCCG AGCGATGGGC
AACAAGGCTG GCGCCAAGCG CCTCATGGAA GCGGCCGGCG TGCCGTGCGT GCCCGGTTAT
CAGGGCGAGG ACCAATCCGC CACACGCATG GCGGACGAAG CGGCGCGCAT CGGCTACCCG
GTGATGATCA AGGCGGCCGC TGGCGGTGGC GGGCGCGGCA TGCGGCGCGT AGACCGGCCC
GAGGCGTTAG CGGCGGCGCT GCAGTCTGCC CGCTCCGAAG CGGAGAACGC GTTTGGCTCG
GGCGAGTTGA TCCTCGAGAA AGCCATCGTC GAGCCGCGCC ACATCGAGAT CCAGGTGTTT
GCCGATACGC ATGGCAACGT GGTTCACCTG GGCGAGCGCG ATTGCTCGGT GCAGCGCCGG
CATCAGAAGG TGATTGAAGA ATCGCCGTCA CCAGCCGTAT CGCCCGAGTT GCGCGCGCGC
ATGGGCGCGG TGTCGGTGGC GGCGGCGCGC GCGATCGGCT ACGTGGGTGC GGGCACGCTG
GAGTTTCTGC TCGCCCCGGA CGGCGCGTTC TACTTCATGG AGATGAACGC GCGCCTGCAG
GTCGAGCATG CGGTGACCGA AGCGATCGTG GGCGTCGATC TGGTCGAGTG GCAGTTGCGC
GTGGCGCTGG GCGAGCCGTT GCCGCTTGCG CAAGACGCCA TCGACGCCCG CCGTGCACAA
GGCGGCCACG CCATCGAAGT GCGTCTGTGC GCAGAAGACC CGCAGCAGAA TTTCCTGCCG
CAAAGCGGCA CCGTCGCGCG CTGGCGTGCA CCCGGAGACG TGCGCACGGA CCATGCGTTG
GCCGACGGGC TGGTTGTCTC GCCGTACTAC GATTCGATGC TCGCCAAGAT CGTCGCGCAC
GGCACCGACC GCGCCGATGC ATGCCGGCGT CTCGCGCACG CCCTGGACGA TTGCCTGCTG
CTTGGGTTGC CCACCAACCG GGCGTTTCTG CGCGACTGCT TGGCGCATCC GGCGTTTCTT
GCCGGCGATG TGTCGACGGC GTTCATCGAC CGCCATTTCC CGGCGGCGAC GCGGCAGGCG
CCCGTACCCG ACGCCGCGGT CTGCCAGGCC GCTGCCGTGC TGATCACGTA CCTGCGCCAG
GACGCCGCAC GCCGCTATCC CGCAGAGCTG CATGGCTGGG CCAGCAGCCG CACGTATCCC
ACGCTGTGCC GCTTCACGCT CGACGGTGAA GTCATCGACA TGCGCGTGCG TGCGCTCGGT
GCGCAGCAAT GGGAGGTGAC CTGGGACGGC GGTGCCACGC AGGTGGCGCT TGTGTCTGGG
GGCGAAGGGC GCATCACGCT GGTGCTGGGC GACACATTCC ACGCGGTGGA TTACGCCGTC
ACGGCCGGCG CTTGCCACTT CGTGCTGAAT GGCATCGAAC ACACCGCCAT CGACACCACC
TACGCCAAGG CCGAGCGCAG CGGCGCGCAA ACCGGCAGCG GCCGCATCAG TGCACCGATG
AACGGTCGCG TGGTTGCCGT ACACGTGGCC GAAGGCGAGG CCGTCAGCGC CGGTCAGGTG
CTGCTGGTGG TCGAGGCGAT GAAGATGGAG CACAGCATTG CCGCGCCGCT CGCTGGCGAG
GTGAAGGGGC TGTTCACCCA GGTCGGGGCC CAGGTTGCGC CTGGTGGGTT GCTGATGGAG
ATTGCCGCGG CCTAA
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| Protein sequence | MAAPHAAFRS VLIANRGEIA LRIMRTARRL GMRTVAVYSD ADRDAPHCRA ADLALPIGAS
QPQASYLNVA ALLEAARKSG AQAVHPGYGF LAESDAFAGA CADAGLVFIG PPAGAIRAMG
NKAGAKRLME AAGVPCVPGY QGEDQSATRM ADEAARIGYP VMIKAAAGGG GRGMRRVDRP
EALAAALQSA RSEAENAFGS GELILEKAIV EPRHIEIQVF ADTHGNVVHL GERDCSVQRR
HQKVIEESPS PAVSPELRAR MGAVSVAAAR AIGYVGAGTL EFLLAPDGAF YFMEMNARLQ
VEHAVTEAIV GVDLVEWQLR VALGEPLPLA QDAIDARRAQ GGHAIEVRLC AEDPQQNFLP
QSGTVARWRA PGDVRTDHAL ADGLVVSPYY DSMLAKIVAH GTDRADACRR LAHALDDCLL
LGLPTNRAFL RDCLAHPAFL AGDVSTAFID RHFPAATRQA PVPDAAVCQA AAVLITYLRQ
DAARRYPAEL HGWASSRTYP TLCRFTLDGE VIDMRVRALG AQQWEVTWDG GATQVALVSG
GEGRITLVLG DTFHAVDYAV TAGACHFVLN GIEHTAIDTT YAKAERSGAQ TGSGRISAPM
NGRVVAVHVA EGEAVSAGQV LLVVEAMKME HSIAAPLAGE VKGLFTQVGA QVAPGGLLME
IAAA
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