Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0096 |
Symbol | |
ID | 8017719 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 103472 |
End bp | 104326 |
Gene Length | 855 bp |
Protein Length | 284 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828878 |
Product | 3-hydroxybutyryl-CoA dehydrogenase |
Protein accession | YP_002980078 |
Protein GI | 241661718 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1250] 3-hydroxyacyl-CoA dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.617524 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAATTC AAGTCGTCGG CATCGTCGGT GCCGGAACTA TGGGCAACGG CATTGCGCAA GCGTGCGCCG TGGTCGGGCT GGATGTGGTG ATGGTGGACA TCAGCGATGC CGCCGTGCAG AAGGGCATTG CCACCGTGGC CGGCAGCCTG GACCGCCTCA TCAAGAAGGA AAAACTGACC GAAGCGGACA AGGCCGCTGC GCTCGCCCGC ATTCAGGGCT CAACTTCGTA CGACGACCTC AAGCGCGCCG ACCTCGTCAT CGAGGCCGCC ACCGAGAACT TCGACCTGAA GGTGAAGATC CTCAAGCAGC TCGAAGCTGC TGCTGCGCCG CACGCCATCG TGGCGTCGAA CACGTCGTCC ATCTCGATCA CCAAGCTGGC CGCCGTGCTG CAAGACGCGA GCCGCTTCAT CGGCATGCAC TTCTTCAACC CGGTGCCGAT GATGGCGCTG GTGGAAGTCA TCCGTGGCCT GCAGACGAGC GATGCCACGC ATGCGGCTGT CGAAGCGCTG GCCAAGCAGC TCGGCAAGAC GCCGATCACG GTCAAGAACA GCCCGGGCTT TGTCGTCAAC CGCATCCTGT GCCCGATGAT CAACGAGGCG TTCTGCGTGC TGGGTGAAGG CTTAGCCTCG CCCGAGGAAA TCGACGAGGG CATGAAGCTC GGCTGCAATC ACCCGATCGG GCCGCTGGCG CTGGCCGACA TGATCGGCCT GGACACCATG CTGGCCGTGA TGGAAGTGCT GTACACCGAA TTCGGCGACC CGAAATACCG CCCCGCCATG CTGATGCGCG AAATGGTGGC CGCCGGCTAT CTCGGCCGCA AGACCGGCCG CGGCGTGTAC GACTATCGCA AGTAA
|
Protein sequence | MAIQVVGIVG AGTMGNGIAQ ACAVVGLDVV MVDISDAAVQ KGIATVAGSL DRLIKKEKLT EADKAAALAR IQGSTSYDDL KRADLVIEAA TENFDLKVKI LKQLEAAAAP HAIVASNTSS ISITKLAAVL QDASRFIGMH FFNPVPMMAL VEVIRGLQTS DATHAAVEAL AKQLGKTPIT VKNSPGFVVN RILCPMINEA FCVLGEGLAS PEEIDEGMKL GCNHPIGPLA LADMIGLDTM LAVMEVLYTE FGDPKYRPAM LMREMVAAGY LGRKTGRGVY DYRK
|
| |