Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0081 |
Symbol | |
ID | 8017704 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 86180 |
End bp | 87388 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828864 |
Product | putative transcriptional regulator, GntR family |
Protein accession | YP_002980064 |
Protein GI | 241661704 |
COG category | [E] Amino acid transport and metabolism [K] Transcription |
COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.48267 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGAATTCC TGCAATCGCT GCTGGCACCC CGCCTGCAAA ACGTTGAAAC CTCCGCCATC CGCGAGCTGT TCAAGGTGCT CGGCAAGCCG GGCCTGATCT CGTTTGCGGG CGGCTTTCCT GACTCGGCCC TGTTTGACGT GGAAGGCCTG AAGGCCGCGG CCGACAGCGC GCTCACCACC GACGCCGCCC GCGCGCTGCA ATACGGCGCC ACCGAAGGCT TCGAGCCGCT GCGCGAGGCC ATCGTCACGC TGATGAAGGC GCGCGGCGCT AACGTCGCCA ACACCGACAT CCTCGTCACC ACCGGGTCGC AGCAAGGGCT GGATCTGCTG GGCAAGGTGC TGATCGGTGA AGGCGACACA GTGCTGACCG AAGCGCCCAC CTTCCTCGCC GCCATCCAGG CGTTCAAGCT GTACGGCGCC AAGGTGGCCG GCGTACCGAC CGACGGCGAC GGCCTGGATG TCGACGCGCT GGAAAAGGTG CTCTCCACCG CGCGCCCCAA ATTCCTCTAC GTGATTCCCA ACTTCGGCAA CCCGAGCGGC GCGCTGATGA GCCTGGAGCG TCGCAAGCAC CTGCTGGATG TGGCCGTGCG CCACAACCTG CTGATCGTGG AAGACGACCC GTACGGCGAT CTGTATTTCG ACGCGCCCCC GCCGCCGTCG CTGTACGCGC TGTCGCAGCA GACCGACGGC GCGCAGGGGC GTGTGATCTA CCTGGGCAGC TTGTCGAAGG TGGTGGCGCC GGGCCTGCGC GTGGGCTGGA TGATCGCCTC GCAGCCGGTG CTGGGCAACG CGGTGATGGT CAAGCAGTTT GCCGATGCGC ACACCTCCAC GTTTGCGCAG GCCACGGCCG CCGCGTACCT GCGCAGCAAT CGCCTGGAGA CTGTGCTGCC ACGCACGCGT GCGGCCTATG CCGAACGCGC CCACGCCATG GCCAACGGCC TGCGTGCGCT GCTGCCCGAC ACCGAACTGA CCTTCAACCG CCCGCGCGGC GGCATGTTCC TGTGGTGCAC CTTGCCGGGC CGCAATGCCG GCGATGTGGC CAAGGTGGCC ATCGAGCGCG GTGTGGCGTT CGTGCCGGGC GCGGCGTTCT ACCCGGTCGA TCCGGATCGC TCGACGCTGC GTCTGTCGTA CGCCACCTCG TCGCTGGCGC AGGTGGAAGA GGGTGTGCGC AAGCTTGCGC ATGCCATCGG CGAGTTCAAG CTGGGCTGA
|
Protein sequence | MEFLQSLLAP RLQNVETSAI RELFKVLGKP GLISFAGGFP DSALFDVEGL KAAADSALTT DAARALQYGA TEGFEPLREA IVTLMKARGA NVANTDILVT TGSQQGLDLL GKVLIGEGDT VLTEAPTFLA AIQAFKLYGA KVAGVPTDGD GLDVDALEKV LSTARPKFLY VIPNFGNPSG ALMSLERRKH LLDVAVRHNL LIVEDDPYGD LYFDAPPPPS LYALSQQTDG AQGRVIYLGS LSKVVAPGLR VGWMIASQPV LGNAVMVKQF ADAHTSTFAQ ATAAAYLRSN RLETVLPRTR AAYAERAHAM ANGLRALLPD TELTFNRPRG GMFLWCTLPG RNAGDVAKVA IERGVAFVPG AAFYPVDPDR STLRLSYATS SLAQVEEGVR KLAHAIGEFK LG
|
| |