| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0076 |
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| Symbol | |
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| ID | 8017699 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 82396 |
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| End bp | 84186 |
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| Gene Length | 1791 bp |
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| Protein Length | 596 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644828859 |
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| Product | thiamine pyrophosphate protein TPP binding domain protein |
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| Protein accession | YP_002980059 |
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| Protein GI | 241661699 |
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| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
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| COG ID | [COG0028] Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase] |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.686266 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCCA CCGTCAGCGA CTTCCTCGTC GCCCGCCTGT CCGAGTGGGG CGTGCGGCGC
ATCTTTGGTT ACCCCGGCGA CGGCATCAAC GGCATGTTCG GGGCCCTACA GCGCGCCGGC
GGCAAGATCG AGTTCGTGCA GGTGCGGCAT GAAGAGATGG CGGCCTTCAT GGCATCTGCG
CACGCCAAGT TCACGGGTGA GCTTGGCGTG TGCATGGCAA CGTCCGGGCC GGGTGCTGCG
CACCTCATCA CGGGGCTGTA CGACGCTCGG CTCGACCACA TGCCGGTGCT GGCGATTACC
GGGCAGCAGG CGCGCACCGC AGTCGGCGGG CACTACCAGC AGGAGGTGGA TCTGGCGGCG
ATGTTCCGCG ACGTGGCCGG CGCGTTTGTC CACCAGGCCA GCATGCCGGC GCAGGTGCGG
CACCTGCTGG ATCGCGCGGT ACGCATCGCC ATCGGGCAAC GCCGGGTGAC GGCGCTCGTG
CTGCCAAACG ATCTGCAGGA AATGCCCTAC ACCGAACCGC CGCGTGCGCA TGGCACGGTG
CACTCGGGCG TGGGCTACAG CGCGCCGAGC GTGATCCCGC AAGCCGCCGA CCTGGAACGC
GCAGCGGACA TCCTCAACAG CGGCCGCCGG GTGGCGATGC TCGTGGGCGC GGGCGCACTC
GGAGCCAGCG CGGAAGTGGC GGCCGTGGCG GAAACGCTGG GGGCGGGCGT GGCCAAGGCG
CTGCTCGGCA AGGCCGTGTT GCCCGACGAC CTGCCTTATG TGACAGGCGC CATCGGCCTG
CTCGGCACCG AGCCGAGCTG GGAGCTGATG AACCATTGCG ACACGCTGTT GATGGTCGGC
TCCGGCTTTC CGTACGCGGA GTTCCTGCCC AAGGAAGGCC AGGCGCGCGG TGTGCAGATC
GACCTGGACC CCGGCATGCT GGGGCTGCGC TATCCGATGG AGGTCAACCT CGTGGGCGAC
AGCGCGCAGA CGCTGCGTGC ACTGCTGCCG CTGCTCCAGC GCAAGACCGA TCCCTATTGG
CCCGACCGCA TTGCACGCTG GAATGAAAGC TGGTGGAAGA CGCTGGAAGA CCGCGCATTG
CAACCGGCCT ATCCCGTCAA CCCGCAGCAC GTCTTCTGGG AGCTGTCACC GAAGCTGCCG
GACAACGTGA TCGTCACGAG CGACTCCGGC ACCTGCGCCA ACTGGTATGC GCGCGATCTC
AAGTTCAAGC CCGGCATGAT GGGCTCGCTC TCGGGCGGGC TGGCATCGAT GGGTGCGGCG
GTGCCGTATG CGATTGCCGC CAAGTTTGCG CATCCCGAGC GCCCTGTCAT CGCACTGGTG
GGCGACGGCG CCATGCAGAT GAACAACATG GCGGAACTCA TCACCGTGTC GAAATACTGG
AAGCGCTGGA GGTCTTCCAA GTGGATCTGC ATGGTGCTCA ACAATCAGGA TCTGAACGCA
GTCACCTGGG AGCAGCGCGT GATGGAAGGC GATCCGAAAT TCCCGGCGGC ACAAGATATC
CCGAACGTGC CGTATCACCG CTTTGCCGAG TTGATCGGGC TGAAGGGCAT CTACGTGGAC
AACCCCGACC AGCTGGCCGG CGCGTGGGAC GAAGCGCTCA ACGCCGATCG GCCCGTGGTG
CTGGAAGTGA AGACCGATCC CGATGTGCCG CCGCTGCCGC CCCACGTCAT GCTGCAGCAG
GCACGCAACT TTGCGACGGC ACTGGCGTAT GGCGACCCGG ATGCGAGCGG TGTGCTGCGC
GGGACGGCAC GGCAGGTGCT GTCGGCGCTG TTTCCGGTGC ATAGGGAATA G
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| Protein sequence | MQATVSDFLV ARLSEWGVRR IFGYPGDGIN GMFGALQRAG GKIEFVQVRH EEMAAFMASA
HAKFTGELGV CMATSGPGAA HLITGLYDAR LDHMPVLAIT GQQARTAVGG HYQQEVDLAA
MFRDVAGAFV HQASMPAQVR HLLDRAVRIA IGQRRVTALV LPNDLQEMPY TEPPRAHGTV
HSGVGYSAPS VIPQAADLER AADILNSGRR VAMLVGAGAL GASAEVAAVA ETLGAGVAKA
LLGKAVLPDD LPYVTGAIGL LGTEPSWELM NHCDTLLMVG SGFPYAEFLP KEGQARGVQI
DLDPGMLGLR YPMEVNLVGD SAQTLRALLP LLQRKTDPYW PDRIARWNES WWKTLEDRAL
QPAYPVNPQH VFWELSPKLP DNVIVTSDSG TCANWYARDL KFKPGMMGSL SGGLASMGAA
VPYAIAAKFA HPERPVIALV GDGAMQMNNM AELITVSKYW KRWRSSKWIC MVLNNQDLNA
VTWEQRVMEG DPKFPAAQDI PNVPYHRFAE LIGLKGIYVD NPDQLAGAWD EALNADRPVV
LEVKTDPDVP PLPPHVMLQQ ARNFATALAY GDPDASGVLR GTARQVLSAL FPVHRE
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