Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0051 |
Symbol | |
ID | 8017674 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | + |
Start bp | 55663 |
End bp | 56415 |
Gene Length | 753 bp |
Protein Length | 250 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 644828835 |
Product | transcriptional regulator, TetR family |
Protein accession | YP_002980035 |
Protein GI | 241661675 |
COG category | [K] Transcription |
COG ID | [COG1309] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 33 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCAACCT CCGAACCGAC TTCTCGCGGC CCGGGCCGCC CCCGTCGCCA GGATGGCGTA ACGCAGGACG GCCTCCGTGA CCGCCTGCTC GACATCGCCG TCACCCTGTT TGCGCGCGAC GGCGTTGGCC CGACCACGCT TGCTGCCATC GCCCGCGAAG CTGGGGTGAC GGCACCGATG GTGCATTACC ACTTCAAGTC GCGCGATCAA TTGCTCGACG CCGTGGTGGA GGGGCGCATC CGCCCGCTGG TCGATCAAGT GACGCGCCCG GCGCTTGCAA TCATCGCCGA CGACGCGCAT CTGCCCGACC TCGCGCAGAC CTTGGCAGGC GTGGCGCAGC GCATGGTGAC GGTGGCCACG GCCACGCCTT GGTTTCCGAC GCTGTGGATT CGGGAGATCG CCAGCGAAGG CGGCCAGCTG CGCGAGCGTG TGTTCGCGCG CATCGCGCTG GAGCGCGCCA CGTTGCTGGT CGACCGCATT GCCCGCGCAC AAGCGGCGGG CGCGGTGAAC GCGGCACTGC AGCCGCCGCT GGTGATGGTC TCGGTGATCG GCCTGGCGAT GCTGCCGCTG GCGACGCGCG CGCTGTGGGG GCGTCTGCCA CTGGCGGATC AGGTGAGCGA CGAGGCTATC GGGCAGCACG TGGCTGCGCT GCTGCTGCAC GGCATCGGCC CAGTCGCGGC GCCCGAGGAA GCCGGCGGGA AGCAAGCGAA GCCGAAACGC AAGCCTAAGC CAAAGAGCAA GGGACGCAAG TAG
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Protein sequence | MATSEPTSRG PGRPRRQDGV TQDGLRDRLL DIAVTLFARD GVGPTTLAAI AREAGVTAPM VHYHFKSRDQ LLDAVVEGRI RPLVDQVTRP ALAIIADDAH LPDLAQTLAG VAQRMVTVAT ATPWFPTLWI REIASEGGQL RERVFARIAL ERATLLVDRI ARAQAAGAVN AALQPPLVMV SVIGLAMLPL ATRALWGRLP LADQVSDEAI GQHVAALLLH GIGPVAAPEE AGGKQAKPKR KPKPKSKGRK
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