Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0049 |
Symbol | |
ID | 8017672 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 53297 |
End bp | 54523 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 644828833 |
Product | ornithine aminotransferase |
Protein accession | YP_002980033 |
Protein GI | 241661673 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
TIGRFAM ID | [TIGR01885] ornithine aminotransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGACCG CAATGCAACA TCCGAGCTAT GCATTGGAAG ACCGCTACGG CGCACACAAC TACGCGCCGT TGCCGGTCAT GCTGGAACGC GGCGAAGGCG TATGGCTGTT CGATACGGAC GGCCGGCGCT ACCTCGACAT GATGTCGGCG TATTCGGCCG TCAGCTTCGG ACATTCACAT CCGAAACTCG TTGCTGCACT GACGGAGCAG GCCGGCCGGC TGACGCTCAC GTCGCGCGCC TTCCACAATA CCGAGTTGGG ACCCTTCCTG GCCGACGTCT GCCGCATCAC GCGCATGGAC CGCGCGCTGC CCATGAACAC CGGCGCGGAA GCCGTCGAAA CCGCGATCAA AGCAGCCCGA AAATGGGCGC GCGACGTGAA GGGCCTGCCG CCCGAGGCGG CCGAAATCAT CGTCTTCGAC AACAATTTCC ACGGCCGCAC GACAACGATC GTCGGGTTCT CCTCGCACGA TCAATACCGC TATGGATTCG GCCCGTTCGC GGCGGGCTTC CGGCGCATTC CGTTCGGCGA CGCTGATGCG CTACGTGCGG CGATCGGGCC CAACACGGGC GCCATCCTGA TGGAGCCGGT GCAAGGCGAA GGCGGCATCG TCGAACCGCC TGCCGGCTAC CTCAAACTCG CGCGTGAACT TGCCACCCGG CACAACGTGC TCCTCGTCTG CGACGAGGTG CAAACGGGCC TGGGCCGCAC CGGCGATGTG CTGGCGAGCT GGCATGAAGG CGTGGACGCC GATCTGGTGG TGCTGGGCAA GGCGCTCGGC GGCGGCATGG TGCCCGTATC GGCCATTGCC GGGCGCGAGG CGGTCATCGG CGTGTTCCAC CCGGGCGACC ACGGCTCCAC GTTTGGCGGC AACCCGCTCG CAGCGCACAT CGGACGCGCG GCACTCGGCT TGCTGATTGA AGAACAACTG CCACAGCGTG CCGCGCGCGT GGGCGCAGCG TTCGTCAACG AACTGAAGAC GCTCGTTGGC CACGGCGTGC GGCAGGTGCG CGGGCGCGGC TTGATGATCG GCCTGCAACT CGATGCCGAC ATCGACGCGC ACGACTTCGC CTTCGCGCTG GCTGAGCGCG GCGTTCTGAC CAAGGACACC TACGGCAACG TGGTGCGCCT GACACCGCCG CTGGTGATTG GCGAAGCTGA ACTGGCACTG GCACTGGAGG CCATCCGCCA GACGCTGGCC GGCTGGCCAC GGCGCGAGGT GGCGTGA
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Protein sequence | MTTAMQHPSY ALEDRYGAHN YAPLPVMLER GEGVWLFDTD GRRYLDMMSA YSAVSFGHSH PKLVAALTEQ AGRLTLTSRA FHNTELGPFL ADVCRITRMD RALPMNTGAE AVETAIKAAR KWARDVKGLP PEAAEIIVFD NNFHGRTTTI VGFSSHDQYR YGFGPFAAGF RRIPFGDADA LRAAIGPNTG AILMEPVQGE GGIVEPPAGY LKLARELATR HNVLLVCDEV QTGLGRTGDV LASWHEGVDA DLVVLGKALG GGMVPVSAIA GREAVIGVFH PGDHGSTFGG NPLAAHIGRA ALGLLIEEQL PQRAARVGAA FVNELKTLVG HGVRQVRGRG LMIGLQLDAD IDAHDFAFAL AERGVLTKDT YGNVVRLTPP LVIGEAELAL ALEAIRQTLA GWPRREVA
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