Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0039 |
Symbol | |
ID | 8017662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 44125 |
End bp | 44880 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 644828823 |
Product | protein of unknown function DUF218 |
Protein accession | YP_002980023 |
Protein GI | 241661663 |
COG category | [S] Function unknown |
COG ID | [COG1434] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 36 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCTGA CCATCCTGTG TGTGCTGGTG ATCGTGGCAA CGGTGTGCGC AGCACGCGGC CGACGTCGCG CTGCGCGCGG GCTGGCGGTG CTCTGCGGCG TGTTGGTGAT CGCCATCGGC TGCGGACCGA TGCCGGCATG GCTGCTCGAT TCGCTCGAAA AACCGTTCGA GAACGAGCCT CATATCCAAT GGGGCACACG CAACGCCATC GTGCTGCTGG GCGCGGGCAC TTTCCGCGTG GGCGACTCGG TCGAGCCGGG GCTGTTCTCG TATCCGCGGC TGGTGGAAAC CACACAGCTG TACCAGGCGT GCCGCAAGTC CGATGGCGAT TGCAAGATCC TCGTCAGCGG CGGCGATGCA CGTCACCATG GCTCGCCGGA AGCCACCGTG TATCAGCGCG AGCTTGTCAG GCTGGGCGTC GCCAAGGACG ACGTGCTCAT AGAGCCCCAG AGCATGAACA CGTGGCAGAA CGCGCAATTC TCGCGCACGG TGTTGGCGCA ATACGCGCCG GACCGCACGG TGCTCGTGTC GTCCGCCATC CACCTGCGGC GCAGCCTGCT GTATTTCACG CACTTCGGCA TGGCGCCGAT TCCGGTGCGC GCCGACGATC TGCAGGCCGC AGCCTCGCCC TTGCCGATGG CATACAACTT TGCGCTGACC GATTTCGCAT TGCACGAGTG GATCGGCATC GCGCGCTATC ACATGTACAA CGCGCTGGGC TGGAACCCCG CGCGCATCAA CCCCGGTGAC GCCTAA
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Protein sequence | MSLTILCVLV IVATVCAARG RRRAARGLAV LCGVLVIAIG CGPMPAWLLD SLEKPFENEP HIQWGTRNAI VLLGAGTFRV GDSVEPGLFS YPRLVETTQL YQACRKSDGD CKILVSGGDA RHHGSPEATV YQRELVRLGV AKDDVLIEPQ SMNTWQNAQF SRTVLAQYAP DRTVLVSSAI HLRRSLLYFT HFGMAPIPVR ADDLQAAASP LPMAYNFALT DFALHEWIGI ARYHMYNALG WNPARINPGD A
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