Gene Rpic12D_0039 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0039 
Symbol 
ID8017662 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp44125 
End bp44880 
Gene Length756 bp 
Protein Length251 aa 
Translation table11 
GC content65% 
IMG OID644828823 
Productprotein of unknown function DUF218 
Protein accessionYP_002980023 
Protein GI241661663 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones36 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCCTGA CCATCCTGTG TGTGCTGGTG ATCGTGGCAA CGGTGTGCGC AGCACGCGGC 
CGACGTCGCG CTGCGCGCGG GCTGGCGGTG CTCTGCGGCG TGTTGGTGAT CGCCATCGGC
TGCGGACCGA TGCCGGCATG GCTGCTCGAT TCGCTCGAAA AACCGTTCGA GAACGAGCCT
CATATCCAAT GGGGCACACG CAACGCCATC GTGCTGCTGG GCGCGGGCAC TTTCCGCGTG
GGCGACTCGG TCGAGCCGGG GCTGTTCTCG TATCCGCGGC TGGTGGAAAC CACACAGCTG
TACCAGGCGT GCCGCAAGTC CGATGGCGAT TGCAAGATCC TCGTCAGCGG CGGCGATGCA
CGTCACCATG GCTCGCCGGA AGCCACCGTG TATCAGCGCG AGCTTGTCAG GCTGGGCGTC
GCCAAGGACG ACGTGCTCAT AGAGCCCCAG AGCATGAACA CGTGGCAGAA CGCGCAATTC
TCGCGCACGG TGTTGGCGCA ATACGCGCCG GACCGCACGG TGCTCGTGTC GTCCGCCATC
CACCTGCGGC GCAGCCTGCT GTATTTCACG CACTTCGGCA TGGCGCCGAT TCCGGTGCGC
GCCGACGATC TGCAGGCCGC AGCCTCGCCC TTGCCGATGG CATACAACTT TGCGCTGACC
GATTTCGCAT TGCACGAGTG GATCGGCATC GCGCGCTATC ACATGTACAA CGCGCTGGGC
TGGAACCCCG CGCGCATCAA CCCCGGTGAC GCCTAA
 
Protein sequence
MSLTILCVLV IVATVCAARG RRRAARGLAV LCGVLVIAIG CGPMPAWLLD SLEKPFENEP 
HIQWGTRNAI VLLGAGTFRV GDSVEPGLFS YPRLVETTQL YQACRKSDGD CKILVSGGDA
RHHGSPEATV YQRELVRLGV AKDDVLIEPQ SMNTWQNAQF SRTVLAQYAP DRTVLVSSAI
HLRRSLLYFT HFGMAPIPVR ADDLQAAASP LPMAYNFALT DFALHEWIGI ARYHMYNALG
WNPARINPGD A