Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_0038 |
Symbol | |
ID | 8017661 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012856 |
Strand | - |
Start bp | 42908 |
End bp | 43816 |
Gene Length | 909 bp |
Protein Length | 302 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 644828822 |
Product | band 7 protein |
Protein accession | YP_002980022 |
Protein GI | 241661662 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 35 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTCAAG TCACGGCAAG CAAGCTGCCG GTCAAACTGC TCGCGCTCGT CTTCGGCGCC GTCGCGGCGC TGGTGATCGG GCGAACTTTC CTGCTGAACT GGCAGATCAT TCCGCCCGGC TACACGGGCA TCAAGATCAA CCGGCTCGTC GATCGCGGCA TCACGCATGA AAACGTCGTC ACCGGGTTCG TGTTCTACAA CCCCGTGCAG ACTGCGATCA TTCAGTACCC GACTTACGTG CAGCGCGTGA TCTGGACGCA AGACGTGAAC GAAGGCCGCG CGCTCAACGA AGAGCTGACG TTCAACACGA AGGACGCCGT GCCCGTCAAC GTGGACGTGG CTGTCTCGTA CCAGCTCGAC CGCGAGAAGG TGCCAGCCTT CTACACCAAC TTCCGCGCCG ATCGCATCGA GACGTTCACG CACGGCTACC TGCGCGACAC CGCGCGCAAC GTGATCGTCG CCATGGGCTC GGAATACAAC TTTGACGACG TGAACGGCGG CAAAAAGGAA GAGTTCGTCG CGCGGCTGAC CAAGGAGCTG GACACGCGGC TCGCACCGCT GGGCGTGTCG ATCAAGCAGT TCGGCATCGT CGGCTCGCTG CGCCCCCCGC GCGCGTTGCT TGATGCAGTG AGCGCCAAGA CCAAGGCCAT CCAGGATGCG ATCCGCACCG AGAACGAAGT GCGCTCCGCC CAGGCCGAGG CGAAGAAGAA AGTGGCGATT GCCGAAGGGG AAGCCGCGGC CAACCATGCG CTCGCCTCGT CGCTGGATGA CCGGCTGCTC GCCTGGGAAC GCCTGAAGCT CGAACGTGCC GCCATCGAGA AATGGAACGG CGTGACGCCG AGCGTGATGG CGGGCGGTAA CGGCGGCGGC ATGTTGTTCA ACATCCCGGC GGGGGCGCAG AGCAAGTAA
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Protein sequence | MPQVTASKLP VKLLALVFGA VAALVIGRTF LLNWQIIPPG YTGIKINRLV DRGITHENVV TGFVFYNPVQ TAIIQYPTYV QRVIWTQDVN EGRALNEELT FNTKDAVPVN VDVAVSYQLD REKVPAFYTN FRADRIETFT HGYLRDTARN VIVAMGSEYN FDDVNGGKKE EFVARLTKEL DTRLAPLGVS IKQFGIVGSL RPPRALLDAV SAKTKAIQDA IRTENEVRSA QAEAKKKVAI AEGEAAANHA LASSLDDRLL AWERLKLERA AIEKWNGVTP SVMAGGNGGG MLFNIPAGAQ SK
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