| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0024 |
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| Symbol | |
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| ID | 8017647 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | - |
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| Start bp | 27076 |
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| End bp | 29280 |
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| Gene Length | 2205 bp |
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| Protein Length | 734 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644828808 |
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| Product | PAS/PAC sensor hybrid histidine kinase |
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| Protein accession | YP_002980008 |
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| Protein GI | 241661648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG0642] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGTTTC TCGCGCATCA CCATGACTGC CTCGGCTGGA ACGGTGAGAT GGCGCAGCGC
GTGCTGGCAT TCGATTGGGC CTCCACTGAA CTGGGCCCGA TCCAGGACTG GTCACCCAGT
CTGCGTGCCG CTGTGCAAAT GGTGCTGGCG TGCCCGGTGC CGCTGGTCAT GCTGTGGGGC
CGCCACGGCT ACATGGTCTA CAACGATGCC TACGCCGTGT TTGCCGGCGG ACGTCATCCG
TATCTGCTCG GCTGCCCCGT TGAACTCGGC TGGCCCGAAG TGGCGGACTT CAACCGCCAC
GTCATGGATG TCTGCCTCGG TGGCGGCACG CTGTCGTACC GCGACAAGGA ACTCGTCCTG
CTGCGCAACG GCCGCCCCGA AGACGTGTGG ATGGATCTTT ACTACAGCCC GCTTCCCGAT
GACACGGGCC GCCCGGCTGG CGTGCTTGCC ATCGTGGTGG AAACCACCGA GCGCGTGCAG
ACCGAGCGCG AGCGGCAGGC CGCCGAGCAG GCCCTGCGCC AGTTGACCGA AACGCTCGAG
CAACGCGTGG CCGACGCACT GTCTGCCCGC GCCGAAGTGG AAGCGCAATT GCGCCAGGCC
CAGAAGATGG AAGCCATCGG CAACCTGACG GGCGGCGTCG CGCATGATTT CAACAACGTG
CTGCAGGTGA TTGCCGGCAA CCTGCAGATG CTGGCCGTGG AAGCGCCGGG TAACACGCGC
GTTCAGCACC GGGTGGCCGC TGCCACGCGC GCCGTGCAGC GCGGTGCCAC GCTGGCCGCG
CAATTGCTGG CCTTCGCACG GCGGCAGCCA CTCTCGCCTG CGGTGGTGAA CCCGACACGG
CTGATCCAGG GCATGAGCGA GATGCTGCAC CGCGCGCTGG GCGAGGCCAT CAAGGTGCAA
ACGCACCTGG CCGATGACCT GTGGCACGTG CAGGCCGACC GCAACCAGCT CGAGAACGCG
CTGCTGAACC TCGCCATCAA CGCACGCGAT GCCATGCGCG GCGGCGGCGT GCTGACCATC
GCCGCCACCA ACGTCACGCT CGACAGCACG CAGGCGCAGG GGCGCGGCCA GCTTGCGCCC
GGCGACTACG TCGTCTTCTC CGTCACCGAT ACCGGCGTGG GCATGCCGCC CGAAGTGGTC
GAACACGTCT TCGAACCCTT CTTCACCACC AAGCCCGACG GCCACGGCAC AGGCTTGGGG
CTCAGCATGG TGTTCGGCTT CGTCACGCAG AGCGGCGGGC ATGTCGCCAT CAACAGCGCG
GTCGGGCGGG GCACCACGGT GCAGCTTTAC TTCCCGCGCA GCACGGTGGC CGCCCAGGAC
GATGCCCTCG AACTGCGCGA TACCGTCGTC ACGCCCATGG GTGGGCGCGA GACCATCCTC
GTGGTGGAGG ACGACACCGA CGTGCGCCTG ACCGCCGTCG ACATGCTCAC GCAGCTCGGC
TACCGCGTGC TGACCGCCGC CAACGGCGAG GCCGCGCTGG AACTCATGAA CAGCGGCACG
CCCATCGATC TGTTGTTTAC CGACGTGATC ATGCCGGGCC CCATCAAGGG CGGCGAACTG
TCGATCCGGG CCGCGCAACG CGTGCCGCCG CTGCCGGTAC TGCTCGTCTC CGGCTATACG
CGTGACGAAA TCCTGCACGA CGGCAGGCTG CCGCCGGGCG TGACGCTGCT CGACAAACCC
TACCGGCGCG ATGACCTGGC GCGCATGGTG CGCAACGTGC TCAACAGCAG CCGCACAGGG
CAAGCGCAGG TGCAGCCGAC CTCAACGACA TCCATTGACG ATGCTGCAAC TGCGGTTGCC
GACTCGTCGC CACCGCCCAC GGTGCTCCTG GTGGAAGACG ACACCGCCTC CCGCGAAGCC
CTGCAGGAGG TGCTCGCCAC CTTCGGCCTG CAGTGCCTGG CCGCTGCCAC TGCGGAAGAC
GCCCTGGCCC TGGCCCACAC GCGCCCGGTT CAAGTGCTGC TGACCGACCT CACCCTGCCG
GGCCGATCCG GCGCTGACCT CGCCCGTGCG CTGCGGCCGC TGCACCCACA CATGGACGTA
CTGCTGATGA CCGGTTACGG CGCGCACGCC GAGATTGGCG AGCCCATTCC GGGCGCGCGC
GTGCTCGCCA AGCCCGTCGA ACTGACGCTG CTGCATGAAG CGCTGGCGCC ATGGCTCGGT
ACGACCGTAA ACGCGGCAAC GCGACATGTG ACGAACGCCG CATAA
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| Protein sequence | MPFLAHHHDC LGWNGEMAQR VLAFDWASTE LGPIQDWSPS LRAAVQMVLA CPVPLVMLWG
RHGYMVYNDA YAVFAGGRHP YLLGCPVELG WPEVADFNRH VMDVCLGGGT LSYRDKELVL
LRNGRPEDVW MDLYYSPLPD DTGRPAGVLA IVVETTERVQ TERERQAAEQ ALRQLTETLE
QRVADALSAR AEVEAQLRQA QKMEAIGNLT GGVAHDFNNV LQVIAGNLQM LAVEAPGNTR
VQHRVAAATR AVQRGATLAA QLLAFARRQP LSPAVVNPTR LIQGMSEMLH RALGEAIKVQ
THLADDLWHV QADRNQLENA LLNLAINARD AMRGGGVLTI AATNVTLDST QAQGRGQLAP
GDYVVFSVTD TGVGMPPEVV EHVFEPFFTT KPDGHGTGLG LSMVFGFVTQ SGGHVAINSA
VGRGTTVQLY FPRSTVAAQD DALELRDTVV TPMGGRETIL VVEDDTDVRL TAVDMLTQLG
YRVLTAANGE AALELMNSGT PIDLLFTDVI MPGPIKGGEL SIRAAQRVPP LPVLLVSGYT
RDEILHDGRL PPGVTLLDKP YRRDDLARMV RNVLNSSRTG QAQVQPTSTT SIDDAATAVA
DSSPPPTVLL VEDDTASREA LQEVLATFGL QCLAAATAED ALALAHTRPV QVLLTDLTLP
GRSGADLARA LRPLHPHMDV LLMTGYGAHA EIGEPIPGAR VLAKPVELTL LHEALAPWLG
TTVNAATRHV TNAA
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