Gene Rpic12D_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_0018 
Symbol 
ID8017641 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012856 
Strand
Start bp20437 
End bp21135 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content67% 
IMG OID644828802 
Producttranscriptional regulator, Crp/Fnr family 
Protein accessionYP_002980002 
Protein GI241661642 
COG category[T] Signal transduction mechanisms 
COG ID[COG0664] cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGACAC CCCGTGCTCC GACGCCCGCC ACGCAACTGG AAGGCCATGC GTGGTTCACC 
GCGCTTGCGC CTGAACACCA GGCCCTGGCC GCGCGAGAAA CCCTGCTGCA GGCCTTCGAG
CCCGGCGCCT TCATTGCCCG CCGCGGCGAA CCGTCCCGCT ACTGGATCGG CGTGGACACC
GGGCTCATCA AGCTGGCCGT GTACACCGCC GACGGGCGCG GCTGCACGTT CTCGGGCGTA
CCTGCGGGCG GCTGGTGCGG CGAGGGCAGC GTCATCAAGC GCGAAGACCG CCGCTATGAC
GTGATCGCCA TTCGCGCCTC GCACGTGCTG CTGGTGCCCG AACCCGTGTT CAATACGCTG
CTCGCGCAGA GCTTGCCGTT TGCCAGCTTT GTGGTGCGCC AGCTCAACGA ACGCATGGGT
CAGTTCATTG CCACCGTGCA GAACGATCGC CTGCTGAGCG CCGATGCGCG CGTGGCGCAA
GCGATTGCGC AGCTGTTCCA CCCTGCCCTG TACCCGCGCA CGAGCACCGT GCTGGAGCTG
TCGCAAGAAG AGATCGGGCT GCTGACGGGG CTGTCGCGCC AGCGCGTGAA CCGCGCGCTG
CAACGGCTGG CCGAAGGCGG AATGATCGCG CTGTCATACC AGACCATTCG CGTGACCGAC
CTCGAGCGGC TGCGGCTCTT CGGCCTGTCG GAGCTGTAA
 
Protein sequence
MTTPRAPTPA TQLEGHAWFT ALAPEHQALA ARETLLQAFE PGAFIARRGE PSRYWIGVDT 
GLIKLAVYTA DGRGCTFSGV PAGGWCGEGS VIKREDRRYD VIAIRASHVL LVPEPVFNTL
LAQSLPFASF VVRQLNERMG QFIATVQNDR LLSADARVAQ AIAQLFHPAL YPRTSTVLEL
SQEEIGLLTG LSRQRVNRAL QRLAEGGMIA LSYQTIRVTD LERLRLFGLS EL