| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_0014 |
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| Symbol | |
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| ID | 8017637 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012856 |
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| Strand | + |
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| Start bp | 17232 |
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| End bp | 17885 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 644828798 |
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| Product | polar amino acid ABC transporter, inner membrane subunit |
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| Protein accession | YP_002979998 |
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| Protein GI | 241661638 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0765] ABC-type amino acid transport system, permease component |
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| TIGRFAM ID | [TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.792397 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGCCG ACATCCCTCT GTTGCCCATT CTCCTCAAGC TGCGGGAGGG GCTGCTTGCC
ACGCTCATGC TCTCGCTCAT GGCGTTTGCG CTGGGCGGCA CGGCCGGCCT GGTGGTGCTG
TTTGCCCGTG TGGGGCGCAA CGCCACGCTG CAGCGCGTGA GCAAGGCGTA CATCCAGCTC
TTCCAGAACA CGCCGCTGCT CATGCAGATG TTCATCGTGT TCTTTGGTGC GTCCATGGCG
GGGTTCGAGA TGTCGCCGTG GACGGCCGCC GCTATCGGCC TGACGTTGTA CACCAGCGCC
TATCTGGCAG AGGTGTGGCG CGGCTGTGTC GAGGCCATTC CGCGCGGGCA GTGGGAGGCG
TCTTCCAGCC TGGCGATGGG CTACTTCCAA CAGATGCGCC ACGTGGTGCT GCCGCAGGCG
GTGCGCCTGT CGATTGCGCC CACCGTGGGG TTCTCCGTGC AGATCGTCAA GGGCACGGCG
GTGGCCTCCA TCATCGGGTT TGAAGACCTG TCCAAGCTGG GTTCGGTGCT GGCCAATGCC
ACCTTCCAGC CATTCCTCAT CTACGGGCTG GTGGCCATTG GGTATTTCGC GCTGTGCTGG
CCACTGTCTC TTTACGCCTC TCATCTGGAA AAGAAGCTCT ATGCCGCTCG TTGA
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| Protein sequence | MIADIPLLPI LLKLREGLLA TLMLSLMAFA LGGTAGLVVL FARVGRNATL QRVSKAYIQL
FQNTPLLMQM FIVFFGASMA GFEMSPWTAA AIGLTLYTSA YLAEVWRGCV EAIPRGQWEA
SSSLAMGYFQ QMRHVVLPQA VRLSIAPTVG FSVQIVKGTA VASIIGFEDL SKLGSVLANA
TFQPFLIYGL VAIGYFALCW PLSLYASHLE KKLYAAR
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