Gene Rpic12D_5071 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_5071 
Symbol 
ID8017360 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp362032 
End bp362442 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content65% 
IMG OID644828759 
ProductPAAR repeat-containing protein 
Protein accessionYP_002979959 
Protein GI241589934 
COG category[S] Function unknown 
COG ID[COG4104] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.104912 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCCGCC CGCTCATTGT TCTTGGTGAC AAGACCACCC ACGGTGGCAC CGTCATCACC 
GCCGACATGA CAAGCACGAC ACATGGCAAG GCCATGGCGC GCATTGGCGA CATGACGGTT
TGTCCAAAGT GCAAAGGCAC TTTTCCCATT TCCGAAGCCA CCAGCATCGT CTCCGACAGC
GGCGGGCGCG GTTACGCACG CCATCTGGAT GGCACGGCCT GTGGCGCCAA ACTGCTCGCC
AGCCAATCAT TGACCACATC CACCGACGAA GGTAAGGGCA CCGGAGATGG CAGCCTGGCG
CCTGCCGCCG GCCTCGCCGC TGCCATCGCG GCGCCCACGC TGTCGGGGGT ATGCCTGTCG
TGCCTGGTCA AGGCGGCCGC CAGCGGGGGC GCTACCGTGG TGCGAGGCTG A
 
Protein sequence
MTRPLIVLGD KTTHGGTVIT ADMTSTTHGK AMARIGDMTV CPKCKGTFPI SEATSIVSDS 
GGRGYARHLD GTACGAKLLA SQSLTTSTDE GKGTGDGSLA PAAGLAAAIA APTLSGVCLS
CLVKAAASGG ATVVRG