| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpic12D_4971 |
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| Symbol | |
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| ID | 8017398 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Ralstonia pickettii 12D |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012855 |
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| Strand | + |
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| Start bp | 262601 |
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| End bp | 264358 |
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| Gene Length | 1758 bp |
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| Protein Length | 585 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 644828659 |
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| Product | DNA helicase II |
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| Protein accession | YP_002979859 |
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| Protein GI | 241589834 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.00146307 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGGTTGGCG AAGCAGTAGC CGCGGCCGCG CCCGAAAAGA CAGCGGACGA GCGCATCGCC
GAATGCCTCG CCGAGGGTCG CAGTTTCGTT CTCGACGCTG GTGCCGGCGC GGGCAAGACT
TACTCTCTCG TCGAGGGTCT GAAGAAGCTC TGTGCACCGA CGGTCGCCGA CCGGCTCAGG
CGTGACGGGC AGCAGATCGC CTGCATCACC TATACCAATG TGGCCAAGGA CCAGGTGATT
GACCGCATCC AGGGCAACTC TTTGGTGCGT GTCTCGACTA TCCATGACTT CCTATGGAGC
ACGTTGCAGC CCCACCAGCA AGCCCTTCGG CAGGCTCTGC TCGATTTCAA TGCTGCACTC
CCCACGGGGA GCTCGCGTCG GGTTGATCAA GCGGAACTAG CAGCAAGGGT CGCCGCCCGG
CTTGAGGTGA AGTACTCGGA CCGGGGCTCC AAGTTCCTCG AGGGTCGGAT CTATCACGAC
GACCTGCTTT CGATCGCGCG CATCGCCTAC ACCAGATACG ACAAGCTGGC GCGCATCGTG
GCGAGCCGCT ACCCCTACAT CTTCATCGAC GAGTACCAGG ACACCAGCGA AGCAGTGATC
GACATCCTGC TTTGCCGGAT GCTACCGCTG GCTGGCAACA AGCTCGTGCT CGGATTTTTC
GGTGACAAGA TGCAGAACAT CTATCACCAT GGAGAACACA AGGGGATCGG CGAACTTCCA
GCTGAGCTGG CAGCGCCACT TGAGGTCATC GTCAAGCGCG AGAACCGTCG TTGCTCGCTG
CGCGTCATGG ATGTGTTGAA CAACATCCGG ACCGACATCA CGCAGATACC TGGGAGCAAC
AACGCGCAAG GCGACGTAGC GTACATCCGC GTTGCGGCTG GTGCCGATGA AGCGGGTCTT
CAACGCGCAC GCGACCTGCT GACCGACACC TTGAACTGGG ACCTGGCAAG CCAAGGAACA
CGCGAGCTTT ACCTCACCCA TCGGCTGATT GCCCGCAAGG CTGGTTTTGC TGACTTGCTT
CAGGCCTTCA CGGATCGTGG GTCCTTTGCC AAGGATGCCC TCACCGACGG CTCTGATCGG
CGGATTGCGT TCTTCTTGGA GAAGGTTGAA CCGCTGGCCC TGGCCTGGGA GAAGGGGCAG
ATCGGCGAGA CGCTGGGCCG GCTCCATGGC GCGGGGCACC GACTAGCCAG TCGCACAGCA
AAGTCTGGCG TGCGCGATGC GCTTAATGCC CTGACGGCAA AGCGAGCTGC CGGCACAGTC
CGTGAAGTGC TTGAGACGAT CCGCGACCGC CAGCTATTCC CACTGACCGA TGACTTGGCC
CTCCGGCTTG TAAACACGCA GCCCATCCTC ACTGCGGAGA TGGATGATGC CGCGAAAGAG
CGCGAGCAAC TGGAGGCGAC GCTGTACGGG GCCTTCTTCG CGCTTCCCTA CCAGCAGGTC
GCCGCCTTCG CCCGGTTCTT CATGACCAGC ACGCCGTTTG CTACCAAGCA TGGCGTGAAG
GGAGACGAGT TCGATACCGT GCTGGTCGTG CTGGACGACT CCGGCGCCGC GTGGACCTTC
TATTCGTTCG ACAAGTACCT GTCCGGTGCG GATGAGACGG CGAAACCAGA GCGCGCAAAG
CGGTCTCGCA ATGTCTTCTA CGTCTGCTGC TCTAGGGCCC GGCAGAGGCT GGCGGTGATC
GATCTCACCG GTGCTTCCGC GGCGAAGGAC GAGCGAATGC GCACGCTGTT CGGACTGGAC
CGCTGCTATG AGGTATAG
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| Protein sequence | MVGEAVAAAA PEKTADERIA ECLAEGRSFV LDAGAGAGKT YSLVEGLKKL CAPTVADRLR
RDGQQIACIT YTNVAKDQVI DRIQGNSLVR VSTIHDFLWS TLQPHQQALR QALLDFNAAL
PTGSSRRVDQ AELAARVAAR LEVKYSDRGS KFLEGRIYHD DLLSIARIAY TRYDKLARIV
ASRYPYIFID EYQDTSEAVI DILLCRMLPL AGNKLVLGFF GDKMQNIYHH GEHKGIGELP
AELAAPLEVI VKRENRRCSL RVMDVLNNIR TDITQIPGSN NAQGDVAYIR VAAGADEAGL
QRARDLLTDT LNWDLASQGT RELYLTHRLI ARKAGFADLL QAFTDRGSFA KDALTDGSDR
RIAFFLEKVE PLALAWEKGQ IGETLGRLHG AGHRLASRTA KSGVRDALNA LTAKRAAGTV
REVLETIRDR QLFPLTDDLA LRLVNTQPIL TAEMDDAAKE REQLEATLYG AFFALPYQQV
AAFARFFMTS TPFATKHGVK GDEFDTVLVV LDDSGAAWTF YSFDKYLSGA DETAKPERAK
RSRNVFYVCC SRARQRLAVI DLTGASAAKD ERMRTLFGLD RCYEV
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