Gene Rpic12D_4766 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4766 
Symbol 
ID8017478 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp113224 
End bp113709 
Gene Length486 bp 
Protein Length161 aa 
Translation table11 
GC content57% 
IMG OID644828455 
ProductLytic transglycosylase catalytic 
Protein accessionYP_002979655 
Protein GI241589630 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAAG AATGCGCACA GCAGGCCCGC CCCCGTACCG GCCCGTTCAT TTCGAGGCTG 
GCATGGTGTG CCGTTGTTGC TCTACTCATC TGCAGTCTGC CTGCGAAGGC GGACTGCTTC
GACGATGCGG GGGCCTACCA AACGGTGAAC CCGTACGTTC TGAGAGCCAT CGCTTGGCAC
GAATCAAAGG GAGACCCGAC AGCCGTCCAT CGAAACGCCA ATGGATCGAT TGACGTCGGA
GAGTTGCAGA TCAACTCGGT TCACTTCCGC GAACTTGCAA CTTGGGGAAT AACGCCGTCG
GCCTTGCTGG ACCGATGCAT CAACATCTAT GTTGCTGCCT GGCGATTGAA GACGAAGATG
GCAAAGTATG GCAACACCTG GGAAGCCATC GGAGCGTACC ACTCTGAGAC GCCCCAGTAT
CGAGACAGGT ATGCCCGTGA TATTCAGCAG ATCCTTACGT CCTGGGGACA GGTATCGTCG
CGATGA
 
Protein sequence
MFEECAQQAR PRTGPFISRL AWCAVVALLI CSLPAKADCF DDAGAYQTVN PYVLRAIAWH 
ESKGDPTAVH RNANGSIDVG ELQINSVHFR ELATWGITPS ALLDRCINIY VAAWRLKTKM
AKYGNTWEAI GAYHSETPQY RDRYARDIQQ ILTSWGQVSS R