Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpic12D_4766 |
Symbol | |
ID | 8017478 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Ralstonia pickettii 12D |
Kingdom | Bacteria |
Replicon accession | NC_012855 |
Strand | - |
Start bp | 113224 |
End bp | 113709 |
Gene Length | 486 bp |
Protein Length | 161 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 644828455 |
Product | Lytic transglycosylase catalytic |
Protein accession | YP_002979655 |
Protein GI | 241589630 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTGAAG AATGCGCACA GCAGGCCCGC CCCCGTACCG GCCCGTTCAT TTCGAGGCTG GCATGGTGTG CCGTTGTTGC TCTACTCATC TGCAGTCTGC CTGCGAAGGC GGACTGCTTC GACGATGCGG GGGCCTACCA AACGGTGAAC CCGTACGTTC TGAGAGCCAT CGCTTGGCAC GAATCAAAGG GAGACCCGAC AGCCGTCCAT CGAAACGCCA ATGGATCGAT TGACGTCGGA GAGTTGCAGA TCAACTCGGT TCACTTCCGC GAACTTGCAA CTTGGGGAAT AACGCCGTCG GCCTTGCTGG ACCGATGCAT CAACATCTAT GTTGCTGCCT GGCGATTGAA GACGAAGATG GCAAAGTATG GCAACACCTG GGAAGCCATC GGAGCGTACC ACTCTGAGAC GCCCCAGTAT CGAGACAGGT ATGCCCGTGA TATTCAGCAG ATCCTTACGT CCTGGGGACA GGTATCGTCG CGATGA
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Protein sequence | MFEECAQQAR PRTGPFISRL AWCAVVALLI CSLPAKADCF DDAGAYQTVN PYVLRAIAWH ESKGDPTAVH RNANGSIDVG ELQINSVHFR ELATWGITPS ALLDRCINIY VAAWRLKTKM AKYGNTWEAI GAYHSETPQY RDRYARDIQQ ILTSWGQVSS R
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