Gene Rpic12D_4729 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpic12D_4729 
Symbol 
ID8017306 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRalstonia pickettii 12D 
KingdomBacteria 
Replicon accessionNC_012855 
Strand
Start bp71710 
End bp72123 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID644828420 
Producthypothetical protein 
Protein accessionYP_002979620 
Protein GI241589595 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0039354 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.208766 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTGAAT ATCGAACCCG CACTATCAGC GAAGTGGTTG CAAGTACCTG CAATCGGTGT 
CAGCGTCACC TGAGCGCAGA CGAGCCTGGT GAGTGGCAGG AACGGCTGTC GTTCGACCAT
TCCTGCGGTT TCGATTCCGT GTTTGGCGAC GGCAATACGA TCAGCCTCGA TCTATGTCAG
CACTGTGTGC AGGAGGTGCT AGGCGAGTGG TTGCGAATCA CAAAGTCAGC TGACATCGGT
GGCCCGAACA CGCTCGCACA AGCGCTGATG GACATGCCAG ATGCCGGAGA AGATGCCGAC
TTTGCACGCA ACCCGTGCGA TACGCCGCGC GAATCTGCGA AGAAATACGA AGCCCCCGCC
AAATCGATGC ATGCACCGGG GGAATCCAGC GAGAAAGAAC AGAAGCGCAA TTGA
 
Protein sequence
MREYRTRTIS EVVASTCNRC QRHLSADEPG EWQERLSFDH SCGFDSVFGD GNTISLDLCQ 
HCVQEVLGEW LRITKSADIG GPNTLAQALM DMPDAGEDAD FARNPCDTPR ESAKKYEAPA
KSMHAPGESS EKEQKRN